Information for 5-TGCATGGCATTKA (Motif 7)

A C G T C T A G A G T C C G T A A C G T A C T G C T A G A G T C C G T A A C G T A G C T A C G T C G T A
Reverse Opposite:
A C G T T G A C C T G A C G T A A C G T A C T G A G T C A G T C C G T A A C G T A C T G A G T C C G T A
p-value:1e-11
log p-value:-2.607e+01
Information Content per bp:1.933
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.6 +/- 21.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGCATGGCATTKA
-GGTTGGCAT---
 A C G T C T A G A G T C C G T A A C G T A C T G C T A G A G T C C G T A A C G T A G C T A C G T C G T A
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGCATGGCATTKA
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T C T A G A G T C C G T A A C G T A C T G C T A G A G T C C G T A A C G T A G C T A C G T C G T A
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

PB0169.1_Sox15_2/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGCATGGCATTKA-
TNGAATTTCATTNAN
 A C G T A C G T C T A G A G T C C G T A A C G T A C T G C T A G A G T C C G T A A C G T A G C T A C G T C G T A A C G T
A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A

Esrra/MA0592.2/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TGCATGGCATTKA-
---ATGACCTTGAA
 A C G T C T A G A G T C C G T A A C G T A C T G C T A G A G T C C G T A A C G T A G C T A C G T C G T A A C G T
A C G T A C G T A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TGCATGGCATTKA
--BNTGDCCTTG-
 A C G T C T A G A G T C C G T A A C G T A C T G C T A G A G T C C G T A A C G T A G C T A C G T C G T A
A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TGCATGGCATTKA-
----TGACCTTGAN
 A C G T C T A G A G T C C G T A A C G T A C T G C T A G A G T C C G T A A C G T A G C T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TGCATGGCATTKA----
--GCTGACCTTGAACTN
 A C G T C T A G A G T C C G T A A C G T A C T G C T A G A G T C C G T A A C G T A G C T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TGCATGGCATTKA
--NTTGGCANN--
 A C G T C T A G A G T C C G T A A C G T A C T G C T A G A G T C C G T A A C G T A G C T A C G T C G T A
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TGCATGGCATTKA-
----TGACCTTGAV
 A C G T C T A G A G T C C G T A A C G T A C T G C T A G A G T C C G T A A C G T A G C T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGCATGGCATTKA
-NGTGGGCAT---
 A C G T C T A G A G T C C G T A A C G T A C T G C T A G A G T C C G T A A C G T A G C T A C G T C G T A
A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T