Information for 3-AGAGARAGCATCCCCA (Motif 4)

C G T A A C T G C G T A A C T G C T G A T C A G G C T A A C T G G T A C C G T A A C G T A G T C G T A C G T A C G T A C G T C A
Reverse Opposite:
A C G T A C T G A C T G A C T G C T A G G T C A C G A T A C T G T G A C C A G T A G T C A G C T G T A C C G A T T A G C A C G T
p-value:1e-11
log p-value:-2.720e+01
Information Content per bp:1.726
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets56.4 +/- 21.1bp
Average Position of motif in Background40.2 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.61
Offset:10
Orientation:reverse strand
Alignment:AGAGARAGCATCCCCA
----------TCCCCA
 C G T A A C T G C G T A A C T G C T G A T C A G G C T A A C T G G T A C C G T A A C G T A G T C G T A C G T A C G T A C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AGAGARAGCATCCCCA
----KGCCCTTCCCCA
 C G T A A C T G C G T A A C T G C T G A T C A G G C T A A C T G G T A C C G T A A C G T A G T C G T A C G T A C G T A C G T C A
A C G T A C G T A C G T A C G T C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A

TEAD3/MA0808.1/Jaspar

Match Rank:3
Score:0.53
Offset:7
Orientation:forward strand
Alignment:AGAGARAGCATCCCCA
-------ACATTCCA-
 C G T A A C T G C G T A A C T G C T G A T C A G G C T A A C T G G T A C C G T A A C G T A G T C G T A C G T A C G T A C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A A C G T

PH0122.1_Obox2/Jaspar

Match Rank:4
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AGAGARAGCATCCCCA---
--ATAGTTAATCCCCCTCA
 C G T A A C T G C G T A A C T G C T G A T C A G G C T A A C T G G T A C C G T A A C G T A G T C G T A C G T A C G T A C G T C A A C G T A C G T A C G T
A C G T A C G T C T G A C A G T G C T A C A T G G C A T G C A T C G T A G C T A C A G T G T A C A G T C G A T C G A T C G A T C A G C T T G A C G C T A

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:5
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:AGAGARAGCATCCCCA-
-------RCATTCCWGG
 C G T A A C T G C G T A A C T G C T G A T C A G G C T A A C T G G T A C C G T A A C G T A G T C G T A C G T A C G T A C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:6
Score:0.51
Offset:3
Orientation:forward strand
Alignment:AGAGARAGCATCCCCA
---GGGGGAATCCCC-
 C G T A A C T G C G T A A C T G C T G A T C A G G C T A A C T G G T A C C G T A A C G T A G T C G T A C G T A C G T A C G T C A
A C G T A C G T A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:7
Score:0.50
Offset:6
Orientation:forward strand
Alignment:AGAGARAGCATCCCCA
------CACATTCCAT
 C G T A A C T G C G T A A C T G C T G A T C A G G C T A A C T G G T A C C G T A A C G T A G T C G T A C G T A C G T A C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.50
Offset:8
Orientation:forward strand
Alignment:AGAGARAGCATCCCCA--
--------HTTTCCCASG
 C G T A A C T G C G T A A C T G C T G A T C A G G C T A A C T G G T A C C G T A A C G T A G T C G T A C G T A C G T A C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

PH0124.1_Obox5_1/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:AGAGARAGCATCCCCA--
-NANANTTAATCCCNNNN
 C G T A A C T G C G T A A C T G C T G A T C A G G C T A A C T G G T A C C G T A A C G T A G T C G T A C G T A C G T A C G T C A A C G T A C G T
A C G T C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.50
Offset:9
Orientation:forward strand
Alignment:AGAGARAGCATCCCCA--
---------ATGCCCACC
 C G T A A C T G C G T A A C T G C T G A T C A G G C T A A C T G G T A C C G T A A C G T A G T C G T A C G T A C G T A C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C