Information for 19-MAYCATYATCATCATT (Motif 27)

G T A C C G T A A G C T G T A C C G T A A C G T G A T C C G T A A C G T G T A C C G T A A G C T A G T C C G T A A G C T G A C T
Reverse Opposite:
C T G A T C G A G A C T A C T G C T G A C G A T C A T G C G T A A C G T C T A G T G C A A C G T C A T G C T G A A C G T C A T G
p-value:1e-8
log p-value:-1.904e+01
Information Content per bp:1.734
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif9.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.4 +/- 23.6bp
Average Position of motif in Background48.8 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0017.1_Cux1_2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-MAYCATYATCATCATT
TAGTGATCATCATTA--
 A C G T G T A C C G T A A G C T G T A C C G T A A C G T G A T C C G T A A C G T G T A C C G T A A G C T A G T C C G T A A G C T G A C T
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A A C G T A C G T

PB0069.1_Sox21_1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:MAYCATYATCATCATT
NNTAATTATAATNANN
 G T A C C G T A A G C T G T A C C G T A A C G T G A T C C G T A A C G T G T A C C G T A A G C T A G T C C G T A A G C T G A C T
G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A

PB0079.1_Sry_1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:MAYCATYATCATCATT
NANTATTATAATTNNN
 G T A C C G T A A G C T G T A C C G T A A C G T G A T C C G T A A C G T G T A C C G T A A G C T A G T C C G T A A G C T G A C T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

PB0064.1_Sox14_1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:MAYCATYATCATCATT
NNTAATTATAATTNNN
 G T A C C G T A A G C T G T A C C G T A A C G T G A T C C G T A A C G T G T A C C G T A A G C T A G T C C G T A A G C T G A C T
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

PB0174.1_Sox30_2/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:MAYCATYATCATCATT
TAAGATTATAATACGG
 G T A C C G T A A G C T G T A C C G T A A C G T G A T C C G T A A C G T G T A C C G T A A G C T A G T C C G T A A G C T G A C T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-MAYCATYATCATCATT
AAACMATTAN-------
 A C G T G T A C C G T A A G C T G T A C C G T A A C G T G A T C C G T A A C G T G T A C C G T A A G C T A G T C C G T A A G C T G A C T
T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:MAYCATYATCATCATT
--YCATTAMC------
 G T A C C G T A A G C T G T A C C G T A A C G T G A T C C G T A A C G T G T A C C G T A A G C T A G T C C G T A A G C T G A C T
A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----MAYCATYATCATCATT
NNNTAACAATTATAN-----
 A C G T A C G T A C G T A C G T G T A C C G T A A G C T G T A C C G T A A C G T G A T C C G T A A C G T G T A C C G T A A G C T A G T C C G T A A G C T G A C T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G A C G T A C G T A C G T A C G T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----MAYCATYATCATCATT
GCAACCTCATTATNNNN---
 A C G T A C G T A C G T A C G T G T A C C G T A A G C T G T A C C G T A A C G T G A T C C G T A A C G T G T A C C G T A A G C T A G T C C G T A A G C T G A C T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-MAYCATYATCATCATT
ADGGYAGYAGCATCT--
 A C G T G T A C C G T A A G C T G T A C C G T A A C G T G A T C C G T A A C G T G T A C C G T A A G C T A G T C C G T A A G C T G A C T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T A C G T