Information for 12-GGCAGTDGCTTCCWTC (Motif 14)

C T A G A C T G A G T C C G T A A C T G A G C T C G T A A C T G A G T C A C G T A C G T A G T C A G T C G C A T A C G T A G T C
Reverse Opposite:
C T A G T G C A C G T A A C T G C T A G G T C A C G T A T A C G G T A C G A C T T C G A A G T C C G A T A C T G A G T C G A T C
p-value:1e-9
log p-value:-2.262e+01
Information Content per bp:1.718
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.8 +/- 31.4bp
Average Position of motif in Background20.5 +/- 5.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:GGCAGTDGCTTCCWTC
--CAGCTGTTTCCT--
 C T A G A C T G A G T C C G T A A C T G A G C T C G T A A C T G A G T C A C G T A C G T A G T C A G T C G C A T A C G T A G T C
A C G T A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGCAGTDGCTTCCWTC
ADGGYAGYAGCATCT---
 A C G T A C G T C T A G A C T G A G T C C G T A A C T G A G C T C G T A A C T G A G T C A C G T A C G T A G T C A G T C G C A T A C G T A G T C
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GGCAGTDGCTTCCWTC
NNNTGGCAGTTGGTNN----
 A C G T A C G T A C G T A C G T C T A G A C T G A G T C C G T A A C T G A G C T C G T A A C T G A G T C A C G T A C G T A G T C A G T C G C A T A C G T A G T C
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGCAGTDGCTTCCWTC
AGCAGCTGCT------
 C T A G A C T G A G T C C G T A A C T G A G C T C G T A A C T G A G T C A C G T A C G T A G T C A G T C G C A T A C G T A G T C
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGCAGTDGCTTCCWTC
CACGGCAGTTGGTNN----
 A C G T A C G T A C G T C T A G A C T G A G T C C G T A A C T G A G C T C G T A A C T G A G T C A C G T A C G T A G T C A G T C G C A T A C G T A G T C
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGCAGTDGCTTCCWTC
AGCAGCTGCTNN----
 C T A G A C T G A G T C C G T A A C T G A G C T C G T A A C T G A G T C A C G T A C G T A G T C A G T C G C A T A C G T A G T C
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGCAGTDGCTTCCWTC
AGAAATGACTTCCCT-
 C T A G A C T G A G T C C G T A A C T G A G C T C G T A A C T G A G T C A C G T A C G T A G T C A G T C G C A T A C G T A G T C
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGCAGTDGCTTCCWTC
TGGCAGTTGG-------
 A C G T C T A G A C T G A G T C C G T A A C T G A G C T C G T A A C T G A G T C A C G T A C G T A G T C A G T C G C A T A C G T A G T C
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.57
Offset:7
Orientation:forward strand
Alignment:GGCAGTDGCTTCCWTC
-------GCTTCC---
 C T A G A C T G A G T C C G T A A C T G A G C T C G T A A C T G A G T C A C G T A C G T A G T C A G T C G C A T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:10
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GGCAGTDGCTTCCWTC-
-----NNAYTTCCTGHN
 C T A G A C T G A G T C C G T A A C T G A G C T C G T A A C T G A G T C A C G T A C G T A G T C A G T C G C A T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T