Information for 7-AGAACTCGCCTGC (Motif 9)

C G T A A C T G C G T A C G T A A G T C A G C T A G T C A C T G A G T C A G T C A C G T A C T G G A T C
Reverse Opposite:
C A T G A G T C C G T A A C T G C T A G A G T C C T A G C T G A A C T G A C G T A C G T A G T C A C G T
p-value:1e-10
log p-value:-2.482e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets24.2 +/- 15.2bp
Average Position of motif in Background38.0 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AGAACTCGCCTGC
-NNACTTGCCTT-
 C G T A A C T G C G T A C G T A A G T C A G C T A G T C A C T G A G T C A G T C A C G T A C T G G A T C
A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGAACTCGCCTGC
---CCTCACCTG-
 C G T A A C T G C G T A C G T A A G T C A G C T A G T C A C T G A G T C A G T C A C G T A C T G G A T C
A C G T A C G T A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:3
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------AGAACTCGCCTGC
TATCATTAGAACGCT-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A G T C A G C T A G T C A C T G A G T C A G T C A C G T A C T G G A T C
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.52
Offset:3
Orientation:forward strand
Alignment:AGAACTCGCCTGC
---VBSYGTCTGG
 C G T A A C T G C G T A C G T A A G T C A G C T A G T C A C T G A G T C A G T C A C G T A C T G G A T C
A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------AGAACTCGCCTGC
NGNTCTAGAACCNGV----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A G T C A G C T A G T C A C T G A G T C A G T C A C G T A C T G G A T C
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A A C G T A C G T A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AGAACTCGCCTGC--
AGAAATGACTTCCCT
 C G T A A C T G C G T A C G T A A G T C A G C T A G T C A C T G A G T C A G T C A C G T A C T G G A T C A C G T A C G T
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:7
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----AGAACTCGCCTGC
TTCNAAGTACTTNNNNN-
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A G T C A G C T A G T C A C T G A G T C A G T C A C G T A C T G G A T C
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.50
Offset:5
Orientation:forward strand
Alignment:AGAACTCGCCTGC
-----TWGTCTGV
 C G T A A C T G C G T A C G T A A G T C A G C T A G T C A C T G A G T C A G T C A C G T A C T G G A T C
A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.50
Offset:4
Orientation:forward strand
Alignment:AGAACTCGCCTGC-
----NNCACCTGNN
 C G T A A C T G C G T A C G T A A G T C A G C T A G T C A C T G A G T C A G T C A C G T A C T G G A T C A C G T
A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:AGAACTCGCCTGC
-NNACTTACCTN-
 C G T A A C T G C G T A C G T A A G T C A G C T A G T C A C T G A G T C A G T C A C G T A C T G G A T C
A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T