Information for 18-TAACACCATTGTT (Motif 24)

A G C T C G T A C G T A A G T C C G T A G T A C A G T C C G T A A C G T A C G T A C T G C G A T A C G T
Reverse Opposite:
C G T A C G T A A G T C C G T A C G T A A C G T C T A G A C T G A C G T A C T G C G A T A C G T C T G A
p-value:1e-5
log p-value:-1.381e+01
Information Content per bp:1.929
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.34%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.6 +/- 16.4bp
Average Position of motif in Background75.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX9/MA0077.1/Jaspar

Match Rank:1
Score:0.75
Offset:5
Orientation:forward strand
Alignment:TAACACCATTGTT-
-----CCATTGTTC
 A G C T C G T A C G T A A G T C C G T A G T A C A G T C C G T A A C G T A C G T A C T G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.74
Offset:5
Orientation:forward strand
Alignment:TAACACCATTGTT--
-----CCATTGTTYB
 A G C T C G T A C G T A A G T C C G T A G T A C A G T C C G T A A C G T A C G T A C T G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

PB0070.1_Sox30_1/Jaspar

Match Rank:3
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TAACACCATTGTT----
-ANNTCCATTGTTCNNN
 A G C T C G T A C G T A A G T C C G T A G T A C A G T C C G T A A C G T A C G T A C T G C G A T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:4
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:TAACACCATTGTT-
----NCCATTGTTY
 A G C T C G T A C G T A A G T C C G T A G T A C A G T C C G T A A C G T A C G T A C T G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

PB0073.1_Sox7_1/Jaspar

Match Rank:5
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TAACACCATTGTT-------
TNNANNTCTATTGTTNTNNANN
 A C G T A C G T A G C T C G T A C G T A A G T C C G T A G T A C A G T C C G T A A C G T A C G T A C T G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T

Sox5/MA0087.1/Jaspar

Match Rank:6
Score:0.70
Offset:7
Orientation:forward strand
Alignment:TAACACCATTGTT-
-------ATTGTTA
 A G C T C G T A C G T A A G T C C G T A G T A C A G T C C G T A A C G T A C G T A C T G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.70
Offset:4
Orientation:forward strand
Alignment:TAACACCATTGTT-
----NCCATTGTTC
 A G C T C G T A C G T A A G T C C G T A G T A C A G T C C G T A A C G T A C G T A C T G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.69
Offset:5
Orientation:forward strand
Alignment:TAACACCATTGTT--
-----CCATTGTTNY
 A G C T C G T A C G T A A G T C C G T A G T A C A G T C C G T A A C G T A C G T A C T G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.69
Offset:5
Orientation:forward strand
Alignment:TAACACCATTGTT
-----CCTTTGTT
 A G C T C G T A C G T A A G T C C G T A G T A C A G T C C G T A A C G T A C G T A C T G C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

PB0067.1_Sox18_1/Jaspar

Match Rank:10
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TAACACCATTGTT------
---TTCAATTGTTCTAAAA
 A G C T C G T A C G T A A G T C C G T A G T A C A G T C C G T A A C G T A C G T A C T G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A