Information for 9-GGTTTGGCAG (Motif 14)

C A T G C T A G A G C T A C G T C A G T C A T G C T A G G A T C C G T A C A T G
Reverse Opposite:
G T A C G C A T C T A G G A T C G T A C G T C A T G C A T C G A G A T C G T A C
p-value:1e-10
log p-value:-2.306e+01
Information Content per bp:1.661
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif4.46%
Number of Background Sequences with motif627.7
Percentage of Background Sequences with motif1.31%
Average Position of motif in Targets48.8 +/- 27.1bp
Average Position of motif in Background49.9 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GGTTTGGCAG-
-NNTTGGCANN
 C A T G C T A G A G C T A C G T C A G T C A T G C T A G G A T C C G T A C A T G A C G T
A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.71
Offset:3
Orientation:forward strand
Alignment:GGTTTGGCAG
---TTGGCA-
 C A T G C T A G A G C T A C G T C A G T C A T G C T A G G A T C C G T A C A T G
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GGTTTGGCAG
--CTTGGCAA
 C A T G C T A G A G C T A C G T C A G T C A T G C T A G G A T C C G T A C A T G
A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GGTTTGGCAG-
--NTTGGCANN
 C A T G C T A G A G C T A C G T C A G T C A T G C T A G G A T C C G T A C A T G A C G T
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

PH0140.1_Pknox1/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGTTTGGCAG------
GGATTGACAGGTCNTT
 C A T G C T A G A G C T A C G T C A G T C A T G C T A G G A T C C G T A C A T G A C G T A C G T A C G T A C G T A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GGTTTGGCAG-
---TTGACAGC
 C A T G C T A G A G C T A C G T C A G T C A T G C T A G G A T C C G T A C A T G A C G T
A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

PH0170.1_Tgif2/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGTTTGGCAG------
GTATTGACAGCTNNTT
 C A T G C T A G A G C T A C G T C A G T C A T G C T A G G A T C C G T A C A T G A C G T A C G T A C G T A C G T A C G T A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

PH0105.1_Meis3/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGTTTGGCAG------
GTATTGACAGGTNNTT
 C A T G C T A G A G C T A C G T C A G T C A T G C T A G G A T C C G T A C A T G A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGTTTGGCAG
-GGTTGGCAT
 C A T G C T A G A G C T A C G T C A G T C A T G C T A G G A T C C G T A C A T G
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

PH0102.1_Meis1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGTTTGGCAG------
NTATTGACAGCTNNTT
 C A T G C T A G A G C T A C G T C A G T C A T G C T A G G A T C C G T A C A T G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T