Information for 8-AATGTCAAGG (Motif 13)

C G T A C T G A G A C T A C T G C A G T A G T C G T C A C T G A A C T G C T A G
Reverse Opposite:
A G T C A G T C A G C T A C G T A C T G G T C A A G T C C T G A A G C T A C G T
p-value:1e-10
log p-value:-2.424e+01
Information Content per bp:1.861
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.00%
Number of Background Sequences with motif495.0
Percentage of Background Sequences with motif1.03%
Average Position of motif in Targets48.9 +/- 30.3bp
Average Position of motif in Background49.2 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:AATGTCAAGG
-NTGTCAN--
 C G T A C T G A G A C T A C T G C A G T A G T C G T C A C T G A A C T G C T A G
A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AATGTCAAGG---
-AGGTCAAGGTCA
 C G T A C T G A G A C T A C T G C A G T A G T C G T C A C T G A A C T G C T A G A C G T A C G T A C G T
A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

MEIS3/MA0775.1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AATGTCAAGG
CCTGTCAA--
 C G T A C T G A G A C T A C T G C A G T A G T C G T C A C T G A A C T G C T A G
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AATGTCAAGG
RHTGWCAR--
 C G T A C T G A G A C T A C T G C A G T A G T C G T C A C T G A A C T G C T A G
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:5
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AATGTCAAGG---
-AGGTCAAGGTCA
 C G T A C T G A G A C T A C T G C A G T A G T C G T C A C T G A A C T G C T A G A C G T A C G T A C G T
A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

Nr2e1/MA0676.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AATGTCAAGG
AAAAGTCAA--
 A C G T C G T A C T G A G A C T A C T G C A G T A G T C G T C A C T G A A C T G C T A G
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AATGTCAAGG
--TGTCANYT
 C G T A C T G A G A C T A C T G C A G T A G T C G T C A C T G A A C T G C T A G
A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----AATGTCAAGG-
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A G A C T A C T G C A G T A G T C G T C A C T G A A C T G C T A G A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AATGTCAAGG
TCAAGGTCAT--
 A C G T A C G T C G T A C T G A G A C T A C T G C A G T A G T C G T C A C T G A A C T G C T A G
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AATGTCAAGG-
CAAAGGTCAAGGG
 A C G T A C G T C G T A C T G A G A C T A C T G C A G T A G T C G T C A C T G A A C T G C T A G A C G T
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G