Information for 2-TYGKTGCCTG (Motif 6)

G C A T G A T C A T C G A C G T A G C T A C T G A G T C A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G T C A G G T A C C T G A T G C A T A G C C T A G C G T A
p-value:1e-10
log p-value:-2.453e+01
Information Content per bp:1.694
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif6.43%
Number of Background Sequences with motif1060.1
Percentage of Background Sequences with motif2.22%
Average Position of motif in Targets49.6 +/- 24.6bp
Average Position of motif in Background48.6 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TYGKTGCCTG-
-VBSYGTCTGG
 G C A T G A T C A T C G A C G T A G C T A C T G A G T C A G T C A C G T A C T G A C G T
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.72
Offset:6
Orientation:forward strand
Alignment:TYGKTGCCTG--
------GCTGTG
 G C A T G A T C A T C G A C G T A G C T A C T G A G T C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.71
Offset:3
Orientation:forward strand
Alignment:TYGKTGCCTG-
---CTGTCTGG
 G C A T G A T C A T C G A C G T A G C T A C T G A G T C A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.71
Offset:3
Orientation:forward strand
Alignment:TYGKTGCCTG-
---TWGTCTGV
 G C A T G A T C A T C G A C G T A G C T A C T G A G T C A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:TYGKTGCCTG--
--ATTTCCTGTN
 G C A T G A T C A T C G A C G T A G C T A C T G A G T C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TYGKTGCCTG-
-CACTTCCTGT
 G C A T G A T C A T C G A C G T A G C T A C T G A G T C A G T C A C G T A C T G A C G T
A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TYGKTGCCTG------
NNTNNTGTCTGGNNTNG
 A C G T G C A T G A T C A T C G A C G T A G C T A C T G A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TYGKTGCCTG--
--ATTTCCTGTN
 G C A T G A T C A T C G A C G T A G C T A C T G A G T C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TYGKTGCCTG----
----GGTCTGGCAT
 G C A T G A T C A T C G A C G T A G C T A C T G A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TYGKTGCCTG
NNACTTGCCTT
 A C G T G C A T G A T C A T C G A C G T A G C T A C T G A G T C A G T C A C G T A C T G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T