Information for 5-AGAGAAGCYCAGA (Motif 5)

C T G A A T C G C G T A A C T G G T C A C G T A A C T G A T G C G A C T G T A C C G T A A C T G T C G A
Reverse Opposite:
A C G T A G T C C G A T A C T G C T G A A T C G A G T C C G A T A C G T A G T C A C G T A T G C A G C T
p-value:1e-10
log p-value:-2.485e+01
Information Content per bp:1.803
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif16.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets51.3 +/- 26.8bp
Average Position of motif in Background49.5 +/- 21.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0051.1_Osr2_1/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----AGAGAAGCYCAGA
ATGTACAGTAGCAAAG-
 A C G T A C G T A C G T A C G T C T G A A T C G C G T A A C T G G T C A C G T A A C T G A T G C G A C T G T A C C G T A A C T G T C G A
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AGAGAAGCYCAGA
--NGAAGC-----
 C T G A A T C G C G T A A C T G G T C A C G T A A C T G A T G C G A C T G T A C C G T A A C T G T C G A
A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AGAGAAGCYCAGA
ATTTACAGTAGCAAAA-
 A C G T A C G T A C G T A C G T C T G A A T C G C G T A A C T G G T C A C G T A A C T G A T G C G A C T G T A C C G T A A C T G T C G A
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:AGAGAAGCYCAGA--
-----TGCCCAGNHW
 C T G A A T C G C G T A A C T G G T C A C G T A A C T G A T G C G A C T G T A C C G T A A C T G T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AGAGAAGCYCAGA
----AAGGTCAC-
 C T G A A T C G C G T A A C T G G T C A C G T A A C T G A T G C G A C T G T A C C G T A A C T G T C G A
A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.53
Offset:4
Orientation:forward strand
Alignment:AGAGAAGCYCAGA
----CAGCC----
 C T G A A T C G C G T A A C T G G T C A C G T A A C T G A T G C G A C T G T A C C G T A A C T G T C G A
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:AGAGAAGCYCAGA
-------CACAGN
 C T G A A T C G C G T A A C T G G T C A C G T A A C T G A T G C G A C T G T A C C G T A A C T G T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

PB0208.1_Zscan4_2/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:forward strand
Alignment:AGAGAAGCYCAGA-----
--CGAAGCACACAAAATA
 C T G A A T C G C G T A A C T G G T C A C G T A A C T G A T G C G A C T G T A C C G T A A C T G T C G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AGAGAAGCYCAGA
-CAGCTGNT----
 C T G A A T C G C G T A A C T G G T C A C G T A A C T G A T G C G A C T G T A C C G T A A C T G T C G A
A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-AGAGAAGCYCAGA
CAGATAAGGN----
 A C G T C T G A A T C G C G T A A C T G G T C A C G T A A C T G A T G C G A C T G T A C C G T A A C T G T C G A
T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A A C G T A C G T A C G T A C G T