Information for 9-GGCTGCCTTTACA (Motif 13)

T C A G T A C G G A T C A C G T A C T G A G T C A G T C G C A T C A G T A G C T T G C A T G A C T C G A
Reverse Opposite:
A C G T A C T G A C G T C T G A G T C A C G T A T C A G T A C G G T A C T G C A C A T G A G T C A G T C
p-value:1e-8
log p-value:-1.846e+01
Information Content per bp:1.647
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.10%
Number of Background Sequences with motif169.5
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets58.2 +/- 27.3bp
Average Position of motif in Background49.1 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GGCTGCCTTTACA
--CTGCCCGCA--
 T C A G T A C G G A T C A C G T A C T G A G T C A G T C G C A T C A G T A G C T T G C A T G A C T C G A
A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGCTGCCTTTACA
GTCCGCCATTA--
 T C A G T A C G G A T C A C G T A C T G A G T C A G T C G C A T C A G T A G C T T G C A T G A C T C G A
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGCTGCCTTTACA
GGCGCGCT-----
 T C A G T A C G G A T C A C G T A C T G A G T C A G T C G C A T C A G T A G C T T G C A T G A C T C G A
C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GGCTGCCTTTACA
-GCTTCC------
 T C A G T A C G G A T C A C G T A C T G A G T C A G T C G C A T C A G T A G C T T G C A T G A C T C G A
A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:5
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GGCTGCCTTTACA-------
---TCNCTTTACAGCGNNNT
 T C A G T A C G G A T C A C G T A C T G A G T C A G T C G C A T C A G T A G C T T G C A T G A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

TATA-Box(TBP)/Promoter/Homer

Match Rank:6
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GGCTGCCTTTACA---
----CCTTTTATAGNC
 T C A G T A C G G A T C A C G T A C T G A G T C A G T C G C A T C A G T A G C T T G C A T G A C T C G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

POL012.1_TATA-Box/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GGCTGCCTTTACA-
NNNNNNCTTTTATAN
 A C G T T C A G T A C G G A T C A C G T A C T G A G T C A G T C G C A T C A G T A G C T T G C A T G A C T C G A A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GGCTGCCTTTACA
NGCTN--------
 T C A G T A C G G A T C A C G T A C T G A G T C A G T C G C A T C A G T A G C T T G C A T G A C T C G A
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GGCTGCCTTTACA-
NNNNNNCTTTTATAN
 A C G T T C A G T A C G G A T C A C G T A C T G A G T C A G T C G C A T C A G T A G C T T G C A T G A C T C G A A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

PH0056.1_Hoxa9/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GGCTGCCTTTACA-----
-ACGGCCATAAAATTAAT
 T C A G T A C G G A T C A C G T A C T G A G T C A G T C G C A T C A G T A G C T T G C A T G A C T C G A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T