Information for 3-AGCCCVGCCTAAV (Motif 6)

C G T A A C T G A G T C G T A C A G T C T A G C A C T G A G T C A G T C A C G T T C G A C T G A T A C G
Reverse Opposite:
A G T C A G C T A C G T C G T A A C T G A C T G A G T C A C T G A C T G A C T G A C T G A G T C C G A T
p-value:1e-12
log p-value:-2.975e+01
Information Content per bp:1.849
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.9 +/- 22.2bp
Average Position of motif in Background67.1 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AGCCCVGCCTAAV
NNGGCCACGCCTTTN
 A C G T A C G T C G T A A C T G A G T C G T A C A G T C T A G C A C T G A G T C A G T C A C G T T C G A C T G A T A C G
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AGCCCVGCCTAAV
NAGCCCCGCCCCCN
 A C G T C G T A A C T G A G T C G T A C A G T C T A G C A C T G A G T C A G T C A C G T T C G A C T G A T A C G
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGCCCVGCCTAAV
GGCCCCGCCCCC-
 C G T A A C T G A G T C G T A C A G T C T A G C A C T G A G T C A G T C A C G T T C G A C T G A T A C G
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGCCCVGCCTAAV
-GCTCCGCCCMCY
 C G T A A C T G A G T C G T A C A G T C T A G C A C T G A G T C A G T C A C G T T C G A C T G A T A C G
A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGCCCVGCCTAAV
-GCTCGGSCTC--
 C G T A A C T G A G T C G T A C A G T C T A G C A C T G A G T C A G T C A C G T T C G A C T G A T A C G
A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGCCCVGCCTAAV
TGCCCAGNHW---
 C G T A A C T G A G T C G T A C A G T C T A G C A C T G A G T C A G T C A C G T T C G A C T G A T A C G
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGCCCVGCCTAAV---
-GCCCCGCCCCCTCCC
 C G T A A C T G A G T C G T A C A G T C T A G C A C T G A G T C A G T C A C G T T C G A C T G A T A C G A C G T A C G T A C G T
A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGCCCVGCCTAAV--
TACGCCCCGCCACTCTG
 A C G T A C G T C G T A A C T G A G T C G T A C A G T C T A G C A C T G A G T C A G T C A C G T T C G A C T G A T A C G A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AGCCCVGCCTAAV
GGGGCCGAGGCCTG--
 A C G T A C G T A C G T C G T A A C T G A G T C G T A C A G T C T A G C A C T G A G T C A G T C A C G T T C G A C T G A T A C G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGCCCVGCCTAAV
-GCCCCACCCA--
 C G T A A C T G A G T C G T A C A G T C T A G C A C T G A G T C A G T C A C G T T C G A C T G A T A C G
A C G T T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A A C G T A C G T