Information for 13-GCGTAGCGGC (Motif 43)

C A T G G A T C A C T G G C A T C G T A A C T G T A G C A C T G T C A G G T A C
Reverse Opposite:
C A T G A G T C T G A C A T C G G T A C C G A T C G T A T A G C C T A G G A T C
p-value:1e-5
log p-value:-1.210e+01
Information Content per bp:1.702
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.3 +/- 19.6bp
Average Position of motif in Background73.7 +/- 1.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCGTAGCGGC-
-CGCAGCTGCG
 C A T G G A T C A C T G G C A T C G T A A C T G T A G C A C T G T C A G G T A C A C G T
A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCGTAGCGGC
-CGGAGC---
 C A T G G A T C A C T G G C A T C G T A A C T G T A G C A C T G T C A G G T A C
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCGTAGCGGC----
TGCGCATAGGGGAGGAG
 A C G T A C G T A C G T C A T G G A T C A C T G G C A T C G T A A C T G T A G C A C T G T C A G G T A C A C G T A C G T A C G T A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

EGR2/MA0472.2/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCGTAGCGGC
TGCGTGGGCGT
 A C G T C A T G G A T C A C T G G C A T C G T A A C T G T A G C A C T G T C A G G T A C
G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T

PB0094.1_Zfp128_1/Jaspar

Match Rank:5
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------GCGTAGCGGC-
TCTTTGGCGTACCCTAA
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G G A T C A C T G G C A T C G T A A C T G T A G C A C T G T C A G G T A C A C G T
A C G T G A T C G C A T C A G T C A G T C A T G C T A G A G T C C T A G A C G T C G T A G T A C T A G C A G T C A G C T G T C A C T G A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GCGTAGCGGC---
CCGCATAGCAACGGA
 A C G T A C G T C A T G G A T C A C T G G C A T C G T A A C T G T A G C A C T G T C A G G T A C A C G T A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0154.1_Osr1_2/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GCGTAGCGGC-
NNNTTAGGTAGCNTNT
 A C G T A C G T A C G T A C G T A C G T C A T G G A T C A C T G G C A T C G T A A C T G T A G C A C T G T C A G G T A C A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

POL001.1_MTE/Jaspar

Match Rank:8
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------GCGTAGCGGC---
TTTCGAGCGGAACGGTCGC
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G G A T C A C T G G C A T C G T A A C T G T A G C A C T G T C A G G T A C A C G T A C G T A C G T
A C G T G A C T A G C T A G T C C T A G C G T A C T A G A G T C A T C G T A C G C G T A C T A G A G T C A C T G A T C G C G A T G A T C T A C G A G C T

PB0155.1_Osr2_2/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----GCGTAGCGGC-
NNTGTAGGTAGCANNT
 A C G T A C G T A C G T A C G T A C G T C A T G G A T C A C T G G C A T C G T A A C T G T A G C A C T G T C A G G T A C A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

PB0055.1_Rfx4_1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GCGTAGCGGC---
TACCATAGCAACGGT
 A C G T A C G T C A T G G A T C A C T G G C A T C G T A A C T G T A G C A C T G T C A G G T A C A C G T A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T