Information for 23-WARTTGAWCWATT (Motif 42)

C G A T C G T A C T G A A C G T A C G T A C T G C G T A C G A T A G T C C G T A C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T C G A T A C T G C G T A C G A T A G T C C G T A C G T A A G C T A C G T C G T A
p-value:1e-6
log p-value:-1.417e+01
Information Content per bp:1.878
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.8 +/- 33.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----WARTTGAWCWATT--
HWWNNTAATTRGCHAATTAN
 A C G T A C G T A C G T A C G T A C G T C G A T C G T A C T G A A C G T A C G T A C T G C G T A C G A T A G T C C G T A C G T A A C G T A C G T A C G T A C G T
G C A T C G A T C G A T C A G T G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A C G A T A G C T C T G A C T A G

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:WARTTGAWCWATT
--GTTGCGCAAT-
 C G A T C G T A C T G A A C G T A C G T A C T G C G T A C G A T A G T C C G T A C G T A A C G T A C G T
A C G T A C G T T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:WARTTGAWCWATT----
NNNNNGAACAATTGANN
 C G A T C G T A C T G A A C G T A C G T A C T G C G T A C G A T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:WARTTGAWCWATT-----
-TAGTGAACAATAGATTT
 C G A T C G T A C T G A A C G T A C G T A C T G C G T A C G A T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:WARTTGAWCWATT----
-TTTAGAACAATAAAAT
 C G A T C G T A C T G A A C G T A C G T A C T G C G T A C G A T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:WARTTGAWCWATT
TAATTGATTA---
 C G A T C G T A C T G A A C G T A C G T A C T G C G T A C G A T A G T C C G T A C G T A A C G T A C G T
C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A A C G T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:WARTTGAWCWATT
--ATTGATTYND-
 C G A T C G T A C T G A A C G T A C G T A C T G C G T A C G A T A G T C C G T A C G T A A C G T A C G T
A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:WARTTGAWCWATT-----
---ATAAACAATTAAACA
 C G A T C G T A C T G A A C G T A C G T A C T G C G T A C G A T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

PB0070.1_Sox30_1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:WARTTGAWCWATT-----
--AATGAACAATGGAATT
 C G A T C G T A C T G A A C G T A C G T A C T G C G T A C G A T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

CUX1/MA0754.1/Jaspar

Match Rank:10
Score:0.61
Offset:4
Orientation:forward strand
Alignment:WARTTGAWCWATT-
----TAATCGATAA
 C G A T C G T A C T G A A C G T A C G T A C T G C G T A C G A T A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A