Information for 22-TTAATATTAHCTA (Motif 40)

C G A T A G C T G T C A G T C A C G A T C G T A A C G T C G A T C G T A G C T A A T G C C G A T T C G A
Reverse Opposite:
A C G T C G T A A T C G C A G T A C G T C G T A C G T A A C G T C G T A A C G T C A G T C T G A C G T A
p-value:1e-6
log p-value:-1.466e+01
Information Content per bp:1.745
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif55.2
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets54.1 +/- 27.7bp
Average Position of motif in Background51.4 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TTAATATTAHCTA
NNTNNCAATATTAG---
 A C G T A C G T A C G T A C G T C G A T A G C T G T C A G T C A C G A T C G T A A C G T C G A T C G T A G C T A A T G C C G A T T C G A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TTAATATTAHCTA
NNTNNCAATATTAG---
 A C G T A C G T A C G T A C G T C G A T A G C T G T C A G T C A C G A T C G T A A C G T C G A T C G T A G C T A A T G C C G A T T C G A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T

Lhx3/MA0135.1/Jaspar

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TTAATATTAHCTA---
---AAATTAATTAATC
 C G A T A G C T G T C A G T C A C G A T C G T A A C G T C G A T C G T A G C T A A T G C C G A T T C G A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T C G A C G T A A C G T A C G T C G T A C G T A G A C T A G C T G C T A C G T A G A C T A G T C

Arid3b/MA0601.1/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TTAATATTAHCTA-
---ATATTAATTAA
 C G A T A G C T G T C A G T C A C G A T C G T A A C G T C G A T C G T A G C T A A T G C C G A T T C G A A C G T
A C G T A C G T A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

Dlx1/MA0879.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TTAATATTAHCTA
-CCTAATTATC--
 C G A T A G C T G T C A G T C A C G A T C G T A A C G T C G A T C G T A G C T A A T G C C G A T T C G A
A C G T T G A C T G A C G A C T T G C A G C T A C G A T A C G T G C T A A C G T A T G C A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TTAATATTAHCTA------
--GANGTTAACTAGTTTNN
 C G A T A G C T G T C A G T C A C G A T C G T A A C G T C G A T C G T A G C T A A T G C C G A T T C G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

ALX3/MA0634.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TTAATATTAHCTA
-TCTAATTAAA--
 C G A T A G C T G T C A G T C A C G A T C G T A A C G T C G A T C G T A G C T A A T G C C G A T T C G A
A C G T G A C T A G T C G A C T C T G A G T C A G C A T G A C T G C T A T C G A T G C A A C G T A C G T

SHOX/MA0630.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TTAATATTAHCTA
--NCAATTAN---
 C G A T A G C T G T C A G T C A C G A T C G T A A C G T C G A T C G T A G C T A A T G C C G A T T C G A
A C G T A C G T A G T C G A T C G C T A G T C A A G C T A G C T C G T A C T G A A C G T A C G T A C G T

HOXB2/MA0902.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TTAATATTAHCTA
-AGTAATTAAC--
 C G A T A G C T G T C A G T C A C G A T C G T A A C G T C G A T C G T A G C T A A T G C C G A T T C G A
A C G T T C G A T A C G G A C T T G C A T C G A A C G T G A C T G C T A T C G A T G A C A C G T A C G T

PH0118.1_Nkx6-1_1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TTAATATTAHCTA-----
-GAAAATTAATTACTTCG
 C G A T A G C T G T C A G T C A C G A T C G T A A C G T C G A T C G T A G C T A A T G C C G A T T C G A A C G T A C G T A C G T A C G T A C G T
A C G T C T A G T G C A G C T A C G T A C G T A C G A T A G C T C G T A C G T A C G A T A C G T C T G A G T A C G A C T A G C T A G T C A T C G