Information for 13-CTGGAACCAGACAAGG (Motif 27)

G T A C C A G T A C T G T A C G C T G A C T G A A G T C A G T C T C G A T C A G C G T A A T G C G T C A G T C A C T A G C T A G
Reverse Opposite:
A G T C A G T C A C G T C A G T T A C G G A C T A G T C A C G T T A C G T C A G A G C T A G C T A T G C A G T C G T C A A C T G
p-value:1e-8
log p-value:-1.993e+01
Information Content per bp:1.690
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif20.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets42.1 +/- 19.8bp
Average Position of motif in Background45.0 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTGGAACCAGACAAGG--
-GGGRAARRGRMCAGMTG
 G T A C C A G T A C T G T A C G C T G A C T G A A G T C A G T C T C G A T C A G C G T A A T G C G T C A G T C A C T A G C T A G A C G T A C G T
A C G T C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CTGGAACCAGACAAGG
NGNTCTAGAACCNGV-----
 A C G T A C G T A C G T A C G T G T A C C A G T A C T G T A C G C T G A C T G A A G T C A G T C T C G A T C A G C G T A A T G C G T C A G T C A C T A G C T A G
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A A C G T A C G T A C G T A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:3
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTGGAACCAGACAAGG
--GWAAYHTGAKMC--
 G T A C C A G T A C T G T A C G C T G A C T G A A G T C A G T C T C G A T C A G C G T A A T G C G T C A G T C A C T A G C T A G
A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTGGAACCAGACAAGG
-TGGAACAGMA-----
 G T A C C A G T A C T G T A C G C T G A C T G A A G T C A G T C T C G A T C A G C G T A A T G C G T C A G T C A C T A G C T A G
A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T A C G T A C G T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTGGAACCAGACAAGG----
--GGAAGGAAGGAAGGAAGG
 G T A C C A G T A C T G T A C G C T G A C T G A A G T C A G T C T C G A T C A G C G T A A T G C G T C A G T C A C T A G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CTGGAACCAGACAAGG-
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C G T G T A C C A G T A C T G T A C G C T G A C T G A A G T C A G T C T C G A T C A G C G T A A T G C G T C A G T C A C T A G C T A G A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:7
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CTGGAACCAGACAAGG
CWGGCGGGAA----------
 A C G T A C G T A C G T A C G T G T A C C A G T A C T G T A C G C T G A C T G A A G T C A G T C T C G A T C A G C G T A A T G C G T C A G T C A C T A G C T A G
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CTGGAACCAGACAAGG
ACAGGAAGTG-------
 A C G T G T A C C A G T A C T G T A C G C T G A C T G A A G T C A G T C T C G A T C A G C G T A A T G C G T C A G T C A C T A G C T A G
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTGGAACCAGACAAGG
TTGGCANNNTGCCAAG
 G T A C C A G T A C T G T A C G C T G A C T G A A G T C A G T C T C G A T C A G C G T A A T G C G T C A G T C A C T A G C T A G
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

MF0001.1_ETS_class/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CTGGAACCAGACAAGG
ACCGGAAG---------
 A C G T G T A C C A G T A C T G T A C G C T G A C T G A A G T C A G T C T C G A T C A G C G T A A T G C G T C A G T C A C T A G C T A G
C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T