Information for 7-GTCATCTTAG (Motif 25)

A C T G A C G T A G T C C G T A G A C T A G T C A C G T A C G T C G T A A T C G
Reverse Opposite:
A T G C G C A T G T C A G T C A A C T G C T G A A C G T A C T G C G T A T G A C
p-value:1e-8
log p-value:-2.029e+01
Information Content per bp:1.851
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.65%
Number of Background Sequences with motif81.8
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets49.8 +/- 24.3bp
Average Position of motif in Background50.1 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf3/MA0605.1/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GTCATCTTAG
ACGTCATC----
 A C G T A C G T A C T G A C G T A G T C C G T A G A C T A G T C A C G T A C G T C G T A A T C G
C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GTCATCTTAG
GTCATN----
 A C T G A C G T A G T C C G T A G A C T A G T C A C G T A C G T C G T A A T C G
T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTCATCTTAG
TGTCANYT---
 A C G T A C T G A C G T A G T C C G T A G A C T A G T C A C G T A C G T C G T A A T C G
A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTCATCTTAG
NTGTCAN-----
 A C G T A C G T A C T G A C G T A G T C C G T A G A C T A G T C A C G T A C G T C G T A A T C G
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTCATCTTAG
GCNGCCATCTTG-
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A G A C T A G T C A C G T A C G T C G T A A T C G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTCATCTTAG
GTGACCTT--
 A C T G A C G T A G T C C G T A G A C T A G T C A C G T A C G T C G T A A T C G
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTCATCTTAG
YSTTATCT---
 A C G T A C T G A C G T A G T C C G T A G A C T A G T C A C G T A C G T C G T A A T C G
A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTCATCTTAG
GKVTCADRTTWC
 A C G T A C G T A C T G A C G T A G T C C G T A G A C T A G T C A C G T A C G T C G T A A T C G
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTCATCTTAG
CCTGTCAA-----
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A G A C T A G T C A C G T A C G T C G T A A T C G
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTCATCTTAG----
GGTCANYTGAGGWCA
 A C G T A C T G A C G T A G T C C G T A G A C T A G T C A C G T A C G T C G T A A T C G A C G T A C G T A C G T A C G T
C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A