Information for 4-CTTGTTGTGG (Motif 18)

A G T C A G C T A C G T A C T G C G A T A G C T A C T G A C G T A C T G C T A G
Reverse Opposite:
A G T C G T A C C G T A T G A C T C G A C G T A G T A C C G T A C T G A A C T G
p-value:1e-10
log p-value:-2.456e+01
Information Content per bp:1.849
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif70.9
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets60.1 +/- 32.2bp
Average Position of motif in Background47.3 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0120.1_Foxj1_2/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--CTTGTTGTGG---
GTNTTGTTGTGANNT
 A C G T A C G T A G T C A G C T A C G T A C T G C G A T A G C T A C T G A C G T A C T G C T A G A C G T A C G T A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CTTGTTGTGG----
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T A G T C A G C T A C G T A C T G C G A T A G C T A C T G A C G T A C T G C T A G A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CTTGTTGTGG----
NNNTGTTGTTGTTNG
 A C G T A G T C A G C T A C G T A C T G C G A T A G C T A C T G A C G T A C T G C T A G A C G T A C G T A C G T A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CTTGTTGTGG----
--NNHTGTGGTTWN
 A G T C A G C T A C G T A C T G C G A T A G C T A C T G A C G T A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTTGTTGTGG
CCCCCTGCTGTG-
 A C G T A C G T A C G T A G T C A G C T A C G T A C T G C G A T A G C T A C T G A C G T A C T G C T A G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CTTGTTGTGG---
---NNTGTGGTTT
 A G T C A G C T A C G T A C T G C G A T A G C T A C T G A C G T A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTTGTTGTGG---
--GTCTGTGGTTT
 A G T C A G C T A C G T A C T G C G A T A G C T A C T G A C G T A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CTTGTTGTGG---
---GCTGTGGTTT
 A G T C A G C T A C G T A C T G C G A T A G C T A C T G A C G T A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CTTGTTGTGG--
------GTGGAT
 A G T C A G C T A C G T A C T G C G A T A G C T A C T G A C G T A C T G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTTGTTGTGG---
NNTTTTGTTTTGATNT
 A C G T A C G T A C G T A G T C A G C T A C G T A C T G C G A T A G C T A C T G A C G T A C T G C T A G A C G T A C G T A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T