Information for 9-GTCTGKGCARSCTYAG (Motif 17)

A T C G A C G T A G T C A C G T A C T G A C T G T A C G A G T C C G T A C T A G A T C G G T A C G A C T A G C T G C T A C T A G
Reverse Opposite:
G A T C C G A T C T G A C T G A A C T G T A G C G A T C A C G T C T A G A G T C T G A C G T A C C G T A C T A G G T C A T A G C
p-value:1e-10
log p-value:-2.477e+01
Information Content per bp:1.703
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.0 +/- 25.4bp
Average Position of motif in Background58.1 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTCTGKGCARSCTYAG
GYCTGGYYTNTGTCA-
 A T C G A C G T A G T C A C G T A C T G A C T G T A C G A G T C C G T A C T A G A T C G G T A C G A C T A G C T G C T A C T A G
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTCTGKGCARSCTYAG
VBSYGTCTGG----------
 A C G T A C G T A C G T A C G T A T C G A C G T A G T C A C G T A C T G A C T G T A C G A G T C C G T A C T A G A T C G G T A C G A C T A G C T G C T A C T A G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GTCTGKGCARSCTYAG
WDNCTGGGCA-------
 A C G T A T C G A C G T A G T C A C G T A C T G A C T G T A C G A G T C C G T A C T A G A T C G G T A C G A C T A G C T G C T A C T A G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTCTGKGCARSCTYAG
CTGTCTGG----------
 A C G T A C G T A T C G A C G T A G T C A C G T A C T G A C T G T A C G A G T C C G T A C T A G A T C G G T A C G A C T A G C T G C T A C T A G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTCTGKGCARSCTYAG
TWGTCTGV----------
 A C G T A C G T A T C G A C G T A G T C A C G T A C T G A C T G T A C G A G T C C G T A C T A G A T C G G T A C G A C T A G C T G C T A C T A G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GTCTGKGCARSCTYAG
NNTNNTGTCTGGNNTNG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A G T C A C G T A C T G A C T G T A C G A G T C C G T A C T A G A T C G G T A C G A C T A G C T G C T A C T A G
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:7
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GTCTGKGCARSCTYAG
-------CAAGCTT--
 A T C G A C G T A G T C A C G T A C T G A C T G T A C G A G T C C G T A C T A G A T C G G T A C G A C T A G C T G C T A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GTCTGKGCARSCTYAG
TGCCTGCGYCMCCTT--
 A C G T A T C G A C G T A G T C A C G T A C T G A C T G T A C G A G T C C G T A C T A G A T C G G T A C G A C T A G C T G C T A C T A G
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GTCTGKGCARSCTYAG
--CTGCGCATGCGC--
 A T C G A C G T A G T C A C G T A C T G A C T G T A C G A G T C C G T A C T A G A T C G G T A C G A C T A G C T G C T A C T A G
A C G T A C G T A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:10
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:GTCTGKGCARSCTYAG
---TGCGCAGGCGC--
 A T C G A C G T A G T C A C G T A C T G A C T G T A C G A G T C C G T A C T A G A T C G G T A C G A C T A G C T G C T A C T A G
A C G T A C G T A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T