Information for 7-AATGAATACAGCC (Motif 14)

C G T A G T C A A C G T C T A G C G T A C T G A A C G T G T C A A G T C C G T A C T A G G T A C A T G C
Reverse Opposite:
A T C G A C T G G A T C A C G T C T A G A C G T G T C A A G C T A C G T A G T C C G T A A C G T A C G T
p-value:1e-11
log p-value:-2.542e+01
Information Content per bp:1.817
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.6 +/- 14.1bp
Average Position of motif in Background89.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0171.1_Sox18_2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AATGAATACAGCC-
NNNNTGAATTCANNNC
 A C G T A C G T C G T A G T C A A C G T C T A G C G T A C T G A A C G T G T C A A G T C C G T A C T A G G T A C A T G C A C G T
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------AATGAATACAGCC
ACTATGAATGAATGAT---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T C A A C G T C T A G C G T A C T G A A C G T G T C A A G T C C G T A C T A G G T A C A T G C
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T A C G T A C G T A C G T

PH0063.1_Hoxb8/Jaspar

Match Rank:3
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------AATGAATACAGCC
ACCGGCAATTAATAAA---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T C A A C G T C T A G C G T A C T G A A C G T G T C A A G T C C G T A C T A G G T A C A T G C
G C T A T A G C A G T C C A T G C T A G G A T C G T C A C G T A C G A T G C A T C G T A G C T A G A C T G T C A C T G A C G T A A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AATGAATACAGCC
-ATGMATATDC--
 C G T A G T C A A C G T C T A G C G T A C T G A A C G T G T C A A G T C C G T A C T A G G T A C A T G C
A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AATGAATACAGCC
-ATGAATATTC--
 C G T A G T C A A C G T C T A G C G T A C T G A A C G T G T C A A G T C C G T A C T A G G T A C A T G C
A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----AATGAATACAGCC
NNTNTCATGAATGT----
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A A C G T C T A G C G T A C T G A A C G T G T C A A G T C C G T A C T A G G T A C A T G C
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T A C G T

PH0110.1_Nkx1-2/Jaspar

Match Rank:7
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------AATGAATACAGCC
GTGCACTAATTAGTGCA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T C A A C G T C T A G C G T A C T G A A C G T G T C A A G T C C G T A C T A G G T A C A T G C
C A T G C A G T A C T G T G A C T C G A G A T C G A C T G T C A C G T A C G A T A C G T C T G A C T A G A C G T C T A G A T G C G C T A A C G T A C G T A C G T

Hoxd3/MA0912.1/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----AATGAATACAGCC
ANGNTAATTANCNCAN--
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A A C G T C T A G C G T A C T G A A C G T G T C A A G T C C G T A C T A G G T A C A T G C
T C G A T A C G C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G C A G A T C G A C T G T A C C G T A C T G A A C G T A C G T

PH0079.1_Hoxd3/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----AATGAATACAGCC
ANGNTAATTANCNCAN--
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A A C G T C T A G C G T A C T G A A C G T G T C A A G T C C G T A C T A G G T A C A T G C
T C G A T A C G C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G C A G A T C G A C T G T A C C G T A C T G A A C G T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AATGAATACAGCC
AAAAAATCAATAAT---
 A C G T A C G T A C G T A C G T C G T A G T C A A C G T C T A G C G T A C T G A A C G T G T C A A G T C C G T A C T A G G T A C A T G C
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T A C G T A C G T A C G T