Information for 3-AGATTTTTCT (Motif 2)

C G T A A C T G C T G A A C G T A G C T A C G T A C G T C G A T A G T C A G C T
Reverse Opposite:
C T G A A C T G G C T A C G T A C G T A C T G A T G C A A G C T A G T C A C G T
p-value:1e-14
log p-value:-3.414e+01
Information Content per bp:1.864
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif5.06%
Number of Background Sequences with motif163.4
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets50.2 +/- 21.8bp
Average Position of motif in Background48.2 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGATTTTTCT----
TAGAANVTTCTAGAA
 A C G T C G T A A C T G C T G A A C G T A G C T A C G T A C G T C G A T A G T C A G C T A C G T A C G T A C G T A C G T
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

PB0148.1_Mtf1_2/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGATTTTTCT-----
-NNTTTTTCTTATNT
 C G T A A C T G C T G A A C G T A G C T A C G T A C G T C G A T A G T C A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

PH0078.1_Hoxd13/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGATTTTTCT------
NNANTTTTATTGGNNN
 C G T A A C T G C T G A A C G T A G C T A C G T A C G T C G A T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AGATTTTTCT------
TTCTAGAANNTTCCAGAANN
 A C G T A C G T A C G T A C G T C G T A A C T G C T G A A C G T A G C T A C G T A C G T C G A T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

NFAT5/MA0606.1/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGATTTTTCT---
---ATTTTCCATT
 C G T A A C T G C T G A A C G T A G C T A C G T A C G T C G A T A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

HSF4/MA0771.1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AGATTTTTCT
TTCTAGAACGTTC-
 A C G T A C G T A C G T A C G T C G T A A C T G C T G A A C G T A G C T A C G T A C G T C G A T A G T C A G C T
C G A T C A G T T A G C A G C T T C G A A T C G G C T A G C T A A G T C T C A G C G A T C G A T A G T C A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AGATTTTTCT-
----TTTTCCA
 C G T A A C T G C T G A A C G T A G C T A C G T A C G T C G A T A G T C A G C T A C G T
A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

PH0064.1_Hoxb9/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGATTTTTCT------
NGANTTTTATGGCTCN
 C G T A A C T G C T G A A C G T A G C T A C G T A C G T C G A T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

RELA/MA0107.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGATTTTTCT
GGGAATTTCC-
 A C G T C G T A A C T G C T G A A C G T A G C T A C G T A C G T C G A T A G T C A G C T
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AGATTTTTCT---
AANTTATTGTTCTNNA
 A C G T A C G T A C G T C G T A A C T G C T G A A C G T A G C T A C G T A C G T C G A T A G T C A G C T A C G T A C G T A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A