Information for 5-GGCCCCGGCTGMR (Motif 10)

A C T G A C T G A G T C G A T C A T G C A G T C A C T G A C T G A G T C G A C T A C T G T G A C C T G A
Reverse Opposite:
A G C T A C T G T G A C C G T A A C T G A G T C A G T C C T A G A T C G C T A G T A C G A G T C A G T C
p-value:1e-6
log p-value:-1.595e+01
Information Content per bp:1.767
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif4.12%
Number of Background Sequences with motif101.7
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets49.1 +/- 13.3bp
Average Position of motif in Background48.5 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGCCCCGGCTGMR-
GGCCYCCTGCTGDGH
 A C G T A C T G A C T G A G T C G A T C A T G C A G T C A C T G A C T G A G T C G A C T A C T G T G A C C T G A A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GGCCCCGGCTGMR
CAGGCCNNGGCCNN-
 A C G T A C G T A C T G A C T G A G T C G A T C A T G C A G T C A C T G A C T G A G T C G A C T A C T G T G A C C T G A
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:3
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GGCCCCGGCTGMR
AAGGKGRCGCAGGCA---
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C G A T C A T G C A G T C A C T G A C T G A G T C G A C T A C T G T G A C C T G A
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGCCCCGGCTGMR
GGCCCCGCCCCC-
 A C T G A C T G A G T C G A T C A T G C A G T C A C T G A C T G A G T C G A C T A C T G T G A C C T G A
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGCCCCGGCTGMR
-CCCCCTGCTGTG
 A C T G A C T G A G T C G A T C A T G C A G T C A C T G A C T G A G T C G A C T A C T G T G A C C T G A
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGCCCCGGCTGMR
-GCTCCG------
 A C T G A C T G A G T C G A T C A T G C A G T C A C T G A C T G A G T C G A C T A C T G T G A C C T G A
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGCCCCGGCTGMR
CGCCTCAGGCA---
 A C G T A C T G A C T G A G T C G A T C A T G C A G T C A C T G A C T G A G T C G A C T A C T G T G A C C T G A
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGCCCCGGCTGMR
-GCTCGGSCTC--
 A C T G A C T G A G T C G A T C A T G C A G T C A C T G A C T G A G T C G A C T A C T G T G A C C T G A
A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GGCCCCGGCTGMR-
----CCTGCTGAGH
 A C T G A C T G A G T C G A T C A T G C A G T C A C T G A C T G A G T C G A C T A C T G T G A C C T G A A C G T
A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGCCCCGGCTGMR
AGCCTCAGGCA---
 A C G T A C T G A C T G A G T C G A T C A T G C A G T C A C T G A C T G A G T C G A C T A C T G T G A C C T G A
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T