Information for 6-WCCTTTSTGGGKR (Motif 4)

C G T A A G T C A G T C A C G T A C G T A C G T A T C G A C G T A C T G A C T G A C T G A C T G C T G A
Reverse Opposite:
A G C T G T A C A G T C A G T C A G T C C G T A A T G C G T C A C G T A C G T A A C T G C T A G C G A T
p-value:1e-13
log p-value:-3.080e+01
Information Content per bp:1.873
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.2 +/- 20.1bp
Average Position of motif in Background24.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:WCCTTTSTGGGKR
-CCTTTGTT----
 C G T A A G T C A G T C A C G T A C G T A C G T A T C G A C G T A C T G A C T G A C T G A C T G C T G A
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T

GLIS3/MA0737.1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:WCCTTTSTGGGKR---
--CTTCGTGGGGGGTC
 C G T A A G T C A G T C A C G T A C G T A C G T A T C G A C G T A C T G A C T G A C T G A C T G C T G A A C G T A C G T A C G T
A C G T A C G T T A G C C A G T G C A T G A T C T C A G G A C T C T A G A C T G C T A G C T A G A C T G T A C G A G C T T G A C

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:WCCTTTSTGGGKR
-CCWTTGTY----
 C G T A A G T C A G T C A C G T A C G T A C G T A T C G A C G T A C T G A C T G A C T G A C T G C T G A
A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:WCCTTTSTGGGKR
-CCWTTGTYYB--
 C G T A A G T C A G T C A C G T A C G T A C G T A T C G A C G T A C T G A C T G A C T G A C T G C T G A
A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:WCCTTTSTGGGKR
--CTTTGT-----
 C G T A A G T C A G T C A C G T A C G T A C G T A T C G A C G T A C T G A C T G A C T G A C T G C T G A
A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--WCCTTTSTGGGKR-
ANTCCTTTGTCTNNNN
 A C G T A C G T C G T A A G T C A G T C A C G T A C G T A C G T A T C G A C G T A C T G A C T G A C T G A C T G C T G A A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----WCCTTTSTGGGKR
AGGVNCCTTTGT-----
 A C G T A C G T A C G T A C G T C G T A A G T C A G T C A C G T A C G T A C G T A T C G A C G T A C T G A C T G A C T G A C T G C T G A
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:WCCTTTSTGGGKR
-CCTTTGTTTT--
 C G T A A G T C A G T C A C G T A C G T A C G T A T C G A C G T A C T G A C T G A C T G A C T G C T G A
A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---WCCTTTSTGGGKR
CAATGCATTGTGGGTA
 A C G T A C G T A C G T C G T A A G T C A G T C A C G T A C G T A C G T A T C G A C G T A C T G A C T G A C T G A C T G C T G A
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

PB0137.1_Irf3_2/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----WCCTTTSTGGGKR
NNGCACCTTTCTCC---
 A C G T A C G T A C G T A C G T C G T A A G T C A G T C A C G T A C G T A C G T A T C G A C G T A C T G A C T G A C T G A C T G C T G A
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T A C G T