p-value: | 1e-3 |
log p-value: | -8.885e+00 |
Information Content per bp: | 1.910 |
Number of Target Sequences with motif | 2.0 |
Percentage of Target Sequences with motif | 0.25% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 42.0 +/- 10.0bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer
Match Rank: | 1 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CAGATTAGTTGGACAG RGGATTAR-------- |
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GSC2/MA0891.1/Jaspar
Match Rank: | 2 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CAGATTAGTTGGACAG GNGGATTAGN------- |
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OTX1/MA0711.1/Jaspar
Match Rank: | 3 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CAGATTAGTTGGACAG CGGATTAN-------- |
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CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer
Match Rank: | 4 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CAGATTAGTTGGACAG -GGATTAGC------- |
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GSC/MA0648.1/Jaspar
Match Rank: | 5 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CAGATTAGTTGGACAG NNGGATTAGN------- |
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MEIS2/MA0774.1/Jaspar
Match Rank: | 6 |
Score: | 0.54 |
Offset: | 9 |
Orientation: | forward strand |
Alignment: | CAGATTAGTTGGACAG- ---------TTGACAGC |
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PH0169.1_Tgif1/Jaspar
Match Rank: | 7 |
Score: | 0.54 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | CAGATTAGTTGGACAG------ -----GATATTGACAGCTGCGT |
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PB0185.1_Tcf1_2/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CAGATTAGTTGGACAG TTGCCCGGATTAGG------- |
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OTX2/MA0712.1/Jaspar
Match Rank: | 9 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CAGATTAGTTGGACAG NGGATTAA-------- |
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MEIS3/MA0775.1/Jaspar
Match Rank: | 10 |
Score: | 0.53 |
Offset: | 9 |
Orientation: | forward strand |
Alignment: | CAGATTAGTTGGACAG- ---------TTGACAGG |
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