Information for 11-CCTTGGSYGT (Motif 16)

A T G C A T G C A G C T A C G T A C T G A T C G A T C G A G C T A C T G A C G T
Reverse Opposite:
C G T A A G T C T C G A T A G C A T G C G T A C C G T A C T G A A T C G A T C G
p-value:1e-6
log p-value:-1.420e+01
Information Content per bp:1.798
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif70.9
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets50.8 +/- 28.1bp
Average Position of motif in Background51.5 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CCTTGGSYGT---
---TGGGTGTGGC
 A T G C A T G C A G C T A C G T A C T G A T C G A T C G A G C T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C

Klf1/MA0493.1/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CCTTGGSYGT----
---TGGGTGTGGCN
 A T G C A T G C A G C T A C G T A C T G A T C G A T C G A G C T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CCTTGGSYGT----
--NTGGGTGTGGCC
 A T G C A T G C A G C T A C G T A C T G A T C G A T C G A G C T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCTTGGSYGT
CCTTTGAWGT
 A T G C A T G C A G C T A C G T A C T G A T C G A T C G A G C T A C T G A C G T
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCTTGGSYGT
--TTGGCA--
 A T G C A T G C A G C T A C G T A C T G A T C G A T C G A G C T A C T G A C G T
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

PB0143.1_Klf7_2/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCTTGGSYGT------
NNNTNGGGCGTATNNTN
 A C G T A T G C A T G C A G C T A C G T A C T G A T C G A T C G A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCTTGGSYGT
TGACCTTGAN---
 A C G T A C G T A C G T A T G C A T G C A G C T A C G T A C T G A T C G A T C G A G C T A C T G A C G T
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T

PB0201.1_Zfp281_2/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCTTGGSYGT-----
NNNATTGGGGGTNTCCT
 A C G T A C G T A T G C A T G C A G C T A C G T A C T G A T C G A T C G A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCTTGGSYGT-
NGCGTGGGCGGR
 A C G T A T G C A T G C A G C T A C G T A C T G A T C G A T C G A G C T A C T G A C G T A C G T
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCTTGGSYGT
TGACCTTGAV---
 A C G T A C G T A C G T A T G C A T G C A G C T A C G T A C T G A T C G A T C G A G C T A C T G A C G T
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T