Information for 9-ATGCAGCATG (Motif 11)

C G T A A G C T A C T G A T G C C G T A T C A G T G A C G C T A C A G T A T C G
Reverse Opposite:
T A G C G T C A C G A T A C T G A G T C G C A T T A C G T G A C T C G A G C A T
p-value:1e-9
log p-value:-2.242e+01
Information Content per bp:1.658
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif7.39%
Number of Background Sequences with motif1469.0
Percentage of Background Sequences with motif3.03%
Average Position of motif in Targets44.7 +/- 26.4bp
Average Position of motif in Background51.1 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ATGCAGCATG---
CCACACAGCAGGAGA
 A C G T A C G T C G T A A G C T A C T G A T G C C G T A T C A G T G A C G C T A C A G T A T C G A C G T A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ATGCAGCATG---
GAGCACAGCAGGACA
 A C G T A C G T C G T A A G C T A C T G A T G C C G T A T C A G T G A C G C T A C A G T A T C G A C G T A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATGCAGCATG---
CCACACAGCAGGAGA
 A C G T A C G T C G T A A G C T A C T G A T G C C G T A T C A G T G A C G C T A C A G T A T C G A C G T A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ATGCAGCATG---
WYATGCATWATGCAT
 A C G T A C G T C G T A A G C T A C T G A T G C C G T A T C A G T G A C G C T A C A G T A T C G A C G T A C G T A C G T
C G T A A G C T C G T A A C G T A C T G G T A C C G T A A C G T C G A T C G T A A C G T A C T G A G T C C G T A C G A T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATGCAGCATG
TTGCAACATN
 C G T A A G C T A C T G A T G C C G T A T C A G T G A C G C T A C A G T A T C G
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ATGCAGCATG
DCTCAGCAGG
 C G T A A G C T A C T G A T G C C G T A T C A G T G A C G C T A C A G T A T C G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATGCAGCATG
ATTGCATCAK-
 A C G T C G T A A G C T A C T G A T G C C G T A T C A G T G A C G C T A C A G T A T C G
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ATGCAGCATG
ATTGCATCAT-
 A C G T C G T A A G C T A C T G A T G C C G T A T C A G T G A C G C T A C A G T A T C G
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ATGCAGCATG----
CAATGCATTGTGGGTA
 A C G T A C G T C G T A A G C T A C T G A T G C C G T A T C A G T G A C G C T A C A G T A T C G A C G T A C G T A C G T A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

ATF4/MA0833.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ATGCAGCATG-
TATTGCATCATCC
 A C G T A C G T C G T A A G C T A C T G A T G C C G T A T C A G T G A C G C T A C A G T A T C G A C G T
A C G T T C G A C G A T C A G T C T A G G T A C T C G A C G A T G A T C G T C A A C G T G T A C G A T C