Information for 8-CTGTGAATGG (Motif 10)

A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C G T C G A T A G T C C G T A G T A C G T C A A C T G
p-value:1e-9
log p-value:-2.302e+01
Information Content per bp:1.921
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif19.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets61.6 +/- 16.0bp
Average Position of motif in Background52.4 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CTGTGAATGG----
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

FOXH1/MA0479.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTGTGAATGG--
-TGTGGATTNNN
 A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G A C G T A C G T
A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTGTGAATGG
GCTGTG-----
 A C G T A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTGTGAATGG--
--GTTAATGGCC
 A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C

PB0028.1_Hbp1_1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTGTGAATGG-----
ACTATGAATGAATGAT
 A C G T A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CTGTGAATGG-----
---TGATTGGCTANN
 A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTGTGAATGG-
NNTGTGGATTSS
 A C G T A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

MF0008.1_MADS_class/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTGTGAATGG
CCATATATGG
 A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G
G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G

PB0137.1_Irf3_2/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTGTGAATGG-----
-GGAGAAAGGTGCGA
 A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

PB0178.1_Sox8_2/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTGTGAATGG
NNTNTCATGAATGT
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T