Information for 12-CGCWCGCACCCGC (Motif 19)

A G T C A C T G G T A C C G T A A G T C C T A G A G T C G T C A G T A C A G T C T G A C A C T G A T G C
Reverse Opposite:
A T C G A G T C A C T G A C T G A C T G A C G T A C T G A G T C C T A G C G A T A C T G A G T C A C T G
p-value:1e-9
log p-value:-2.098e+01
Information Content per bp:1.852
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif10.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets54.4 +/- 21.8bp
Average Position of motif in Background55.4 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CGCWCGCACCCGC
TBGCACGCAA----
 A C G T A G T C A C T G G T A C C G T A A G T C C T A G A G T C G T C A G T A C A G T C T G A C A C T G A T G C
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CGCWCGCACCCGC
TGGCGCGCGCGCCTGA
 A C G T A C G T A C G T A G T C A C T G G T A C C G T A A G T C C T A G A G T C G T C A G T A C A G T C T G A C A C T G A T G C
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

PB0010.1_Egr1_1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CGCWCGCACCCGC---
--TCCGCCCCCGCATT
 A G T C A C T G G T A C C G T A A G T C C T A G A G T C G T C A G T A C A G T C T G A C A C T G A T G C A C G T A C G T A C G T
A C G T A C G T G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T

EGR3/MA0732.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGCWCGCACCCGC---
-CTACGCCCACGCACT
 A G T C A C T G G T A C C G T A A G T C C T A G A G T C G T C A G T A C A G T C T G A C A C T G A T G C A C G T A C G T A C G T
A C G T G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CGCWCGCACCCGC--
---SNGCACCTGCHS
 A G T C A C T G G T A C C G T A A G T C C T A G A G T C G T C A G T A C A G T C T G A C A C T G A T G C A C G T A C G T
A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CGCWCGCACCCGC-
----CGCAGCTGCG
 A G T C A C T G G T A C C G T A A G T C C T A G A G T C G T C A G T A C A G T C T G A C A C T G A T G C A C G T
A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CGCWCGCACCCGC-
----CGCACCTGCT
 A G T C A C T G G T A C C G T A A G T C C T A G A G T C G T C A G T A C A G T C T G A C A C T G A T G C A C G T
A C G T A C G T A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T

EGR1/MA0162.2/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CGCWCGCACCCGC-
CCCCCGCCCCCGCC
 A G T C A C T G G T A C C G T A A G T C C T A G A G T C G T C A G T A C A G T C T G A C A C T G A T G C A C G T
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGCWCGCACCCGC
--CACGCA-----
 A G T C A C T G G T A C C G T A A G T C C T A G A G T C G T C A G T A C A G T C T G A C A C T G A T G C
A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CGCWCGCACCCGC-
---ACGCCCACGCA
 A G T C A C T G G T A C C G T A A G T C C T A G A G T C G T C A G T A C A G T C T G A C A C T G A T G C A C G T
A C G T A C G T A C G T G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A