Information for 6-TTTTTGGCCT (Motif 12)

A C G T C G A T G C A T C A G T A C G T A C T G A T C G A G T C A G T C C G A T
Reverse Opposite:
C G T A C T A G C T A G A T G C A G T C C G T A G T C A C G T A G C T A G T C A
p-value:1e-10
log p-value:-2.482e+01
Information Content per bp:1.834
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.30%
Number of Background Sequences with motif109.9
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets46.5 +/- 25.3bp
Average Position of motif in Background54.8 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX2/MA0465.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TTTTTGGCCT
TTTTATGGCTN
 A C G T A C G T C G A T G C A T C A G T A C G T A C T G A T C G A G T C A G T C C G A T
A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TTTTTGGCCT
---TTGGCA-
 A C G T C G A T G C A T C A G T A C G T A C T G A T C G A G T C A G T C C G A T
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTTTTGGCCT--
NAATTTTATTACCNNN
 A C G T A C G T A C G T A C G T A C G T C G A T G C A T C A G T A C G T A C T G A T C G A G T C A G T C C G A T A C G T A C G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTTTTGGCCT---
WCATTTTGKCCTCYT
 A C G T A C G T A C G T C G A T G C A T C A G T A C G T A C T G A T C G A G T C A G T C C G A T A C G T A C G T A C G T
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TTTTTGGCCT-
--NTTGGCANN
 A C G T C G A T G C A T C A G T A C G T A C T G A T C G A G T C A G T C C G A T A C G T
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TTTTTGGCCT-
---GTGACCTT
 A C G T C G A T G C A T C A G T A C G T A C T G A T C G A G T C A G T C C G A T A C G T
A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTTTTGGCCT--
TGATTGGCTANN
 A C G T C G A T G C A T C A G T A C G T A C T G A T C G A G T C A G T C C G A T A C G T A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTGGCCT
TGATTTATGGCC-
 A C G T A C G T A C G T A C G T C G A T G C A T C A G T A C G T A C T G A T C G A G T C A G T C C G A T
C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TTTTTGGCCT--
----TGACCTYA
 A C G T C G A T G C A T C A G T A C G T A C T G A T C G A G T C A G T C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

PH0056.1_Hoxa9/Jaspar

Match Rank:10
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------TTTTTGGCCT-
ANTAATTTTATGGCCGN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T C A G T A C G T A C T G A T C G A G T C A G T C C G A T A C G T
G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T