Information for 6-GATATATCAACGC (Motif 9)

T A C G T C G A A G C T C G T A G A C T G T C A A C G T G T A C C G T A C G T A A T G C C A T G A G T C
Reverse Opposite:
T A C G G T A C A T C G A C G T C G A T A C T G C G T A A C G T C T G A C G A T T C G A A C G T A T G C
p-value:1e-11
log p-value:-2.635e+01
Information Content per bp:1.714
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.0 +/- 27.2bp
Average Position of motif in Background73.0 +/- 6.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GATATATCAACGC
AATGTATCAAT--
 T A C G T C G A A G C T C G T A G A C T G T C A A C G T G T A C C G T A C G T A A T G C C A T G A G T C
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GATATATCAACGC
TCATCAATCA----
 A C G T T A C G T C G A A G C T C G T A G A C T G T C A A C G T G T A C C G T A C G T A A T G C C A T G A G T C
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T A C G T A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GATATATCAACGC
GCCATAAATCA----
 A C G T A C G T T A C G T C G A A G C T C G T A G A C T G T C A A C G T G T A C C G T A C G T A A T G C C A T G A G T C
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T A C G T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GATATATCAACGC---
TCACCCATCAATAAACA
 A C G T T A C G T C G A A G C T C G T A G A C T G T C A A C G T G T A C C G T A C G T A A T G C C A T G A G T C A C G T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

PBX1/MA0070.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GATATATCAACGC
CCATCAATCAAA--
 A C G T T A C G T C G A A G C T C G T A G A C T G T C A A C G T G T A C C G T A C G T A A T G C C A T G A G T C
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GATATATCAACGC-
--SCTGTCARCACC
 T A C G T C G A A G C T C G T A G A C T G T C A A C G T G T A C C G T A C G T A A T G C C A T G A G T C A C G T
A C G T A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GATATATCAACGC
-WWATRTAAACAN
 T A C G T C G A A G C T C G T A G A C T G T C A A C G T G T A C C G T A C G T A A T G C C A T G A G T C
A C G T G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GATATATCAACGC----
NNNAGATCAAAGGANNN
 T A C G T C G A A G C T C G T A G A C T G T C A A C G T G T A C C G T A C G T A A T G C C A T G A G T C A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0105.1_Arid3a_2/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GATATATCAACGC-
ACCCGTATCAAATTT
 A C G T T A C G T C G A A G C T C G T A G A C T G T C A A C G T G T A C C G T A C G T A A T G C C A T G A G T C A C G T
G T C A G T A C T G A C T A G C T C A G A G C T T C G A A G C T T A G C C T G A C G T A T C G A C G A T G A C T C A G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GATATATCAACGC
---ACATCAAAGG
 T A C G T C G A A G C T C G T A G A C T G T C A A C G T G T A C C G T A C G T A A T G C C A T G A G T C
A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G