Information for 22-GATCATTAAA (Motif 45)

A C T G C G T A A C G T A T G C C T G A A G C T A C G T C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T C G T A C T G A A G C T A T C G C G T A C G A T A G T C
p-value:1e-6
log p-value:-1.483e+01
Information Content per bp:1.954
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif8.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets56.0 +/- 26.9bp
Average Position of motif in Background55.4 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0073.1_Hoxc9/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---GATCATTAAA---
GGAGGTCATTAATTAT
 A C G T A C G T A C G T A C T G C G T A A C G T A T G C C T G A A G C T A C G T C G T A C G T A C G T A A C G T A C G T A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:2
Score:0.75
Offset:4
Orientation:forward strand
Alignment:GATCATTAAA
----ATTAAA
 A C T G C G T A A C G T A T G C C T G A A G C T A C G T C G T A C G T A C G T A
A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A

HOXC10/MA0905.1/Jaspar

Match Rank:3
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GATCATTAAA-
-GTCGTAAAAT
 A C T G C G T A A C G T A T G C C T G A A G C T A C G T C G T A C G T A C G T A A C G T
A C G T T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T

NKX6-1/MA0674.1/Jaspar

Match Rank:4
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GATCATTAAA
-GTAATTAA-
 A C T G C G T A A C G T A T G C C T G A A G C T A C G T C G T A C G T A C G T A
A C G T T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:5
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:GATCATTAAA
--YCATTAMC
 A C T G C G T A A C G T A T G C C T G A A G C T A C G T C G T A C G T A C G T A
A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C

POU6F2/MA0793.1/Jaspar

Match Rank:6
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GATCATTAAA
AGCTCATTAT-
 A C G T A C T G C G T A A C G T A T G C C T G A A G C T A C G T C G T A C G T A C G T A
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:7
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GATCATTAAA--
GGTCGTAAAATT
 A C T G C G T A A C G T A T G C C T G A A G C T A C G T C G T A C G T A C G T A A C G T A C G T
C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T

NKX6-2/MA0675.1/Jaspar

Match Rank:8
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GATCATTAAA
-CTAATTAA-
 A C T G C G T A A C G T A T G C C T G A A G C T A C G T C G T A C G T A C G T A
A C G T A T G C G A C T G T C A G C T A C G A T G C A T C T G A G C T A A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:9
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GATCATTAAA-
GGTCGTAAAAT
 A C T G C G T A A C G T A T G C C T G A A G C T A C G T C G T A C G T A C G T A A C G T
C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T

PH0012.1_Cdx1/Jaspar

Match Rank:10
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GATCATTAAA---
TAAGGTAATAAAATTA
 A C G T A C G T A C G T A C T G C G T A A C G T A T G C C T G A A G C T A C G T C G T A C G T A C G T A A C G T A C G T A C G T
C G A T C T G A T G C A C T A G T C A G G A C T G T C A C T G A C G A T G C T A C G T A G C T A G C T A A G C T C A G T G C T A