Information for 21-ACGTGCTCTG (Motif 43)

C G T A A G T C C T A G A C G T A C T G A G T C C G A T A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G C G T A A C T G A G T C C G T A A G T C A C T G A C G T
p-value:1e-6
log p-value:-1.541e+01
Information Content per bp:1.943
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets49.2 +/- 20.3bp
Average Position of motif in Background69.0 +/- 11.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--ACGTGCTCTG
RTACGTGC----
 A C G T A C G T C G T A A G T C C T A G A C G T A C T G A G T C C G A T A G T C A C G T A C T G
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--ACGTGCTCTG
GGACGTGC----
 A C G T A C G T C G T A A G T C C T A G A C G T A C T G A G T C C G A T A G T C A C G T A C T G
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-ACGTGCTCTG
TACGTGCV---
 A C G T C G T A A G T C C T A G A C G T A C T G A G T C C G A T A G T C A C G T A C T G
A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:4
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----ACGTGCTCTG
GGGTACGTGC----
 A C G T A C G T A C G T A C G T C G T A A G T C C T A G A C G T A C T G A G T C C G A T A G T C A C G T A C T G
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T A C G T A C G T

PB0043.1_Max_1/Jaspar

Match Rank:5
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----ACGTGCTCTG-
TGACCACGTGGTCGGG
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C C T A G A C G T A C T G A G T C C G A T A G T C A C G T A C T G A C G T
C A G T C A T G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T A T G C T C A G C A T G C A T G

MAX::MYC/MA0059.1/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---ACGTGCTCTG
ACCACGTGCTC--
 A C G T A C G T A C G T C G T A A G T C C T A G A C G T A C T G A G T C C G A T A G T C A C G T A C T G
C T G A A G T C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T G A T C A C G T A C G T

MNT/MA0825.1/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ACGTGCTCTG
ACCACGTGCC---
 A C G T A C G T A C G T C G T A A G T C C T A G A C G T A C T G A G T C C G A T A G T C A C G T A C T G
C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C A C G T A C G T A C G T

Id2/MA0617.1/Jaspar

Match Rank:8
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ACGTGCTCTG
TCACGTGC----
 A C G T A C G T C G T A A G T C C T A G A C G T A C T G A G T C C G A T A G T C A C G T A C T G
G A C T A G T C C G T A A G T C A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ACGTGCTCTG
CACGTG-----
 A C G T C G T A A G T C C T A G A C G T A C T G A G T C C G A T A G T C A C G T A C T G
G T A C C T G A A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:10
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---ACGTGCTCTG
NACACGTGCN---
 A C G T A C G T A C G T C G T A A G T C C T A G A C G T A C T G A G T C C G A T A G T C A C G T A C T G
A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C A C G T A C G T A C G T