Information for 1-CCCTCCTCCTGTTGCM (Motif 3)

G T A C A T G C A G T C C G A T A T G C A G T C A C G T A G T C G T A C A G C T A C T G A C G T C A G T C A T G A G T C G T A C
Reverse Opposite:
A C T G C T A G G A T C G T C A G T C A G T A C C T G A A C T G T C A G C G T A A C T G A T C G C G T A A C T G A T C G A C T G
p-value:1e-13
log p-value:-3.098e+01
Information Content per bp:1.791
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.6 +/- 28.1bp
Average Position of motif in Background49.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCCTCCTCCTGTTGCM
-CCCCCTGCTGTG---
 G T A C A T G C A G T C C G A T A T G C A G T C A C G T A G T C G T A C A G C T A C T G A C G T C A G T C A T G A G T C G T A C
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCCTCCTCCTGTTGCM
CNGTCCTCCC------
 G T A C A T G C A G T C C G A T A T G C A G T C A C G T A G T C G T A C A G C T A C T G A C G T C A G T C A T G A G T C G T A C
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CCCTCCTCCTGTTGCM-
----CCACCTGTTGCAT
 G T A C A T G C A G T C C G A T A T G C A G T C A C G T A G T C G T A C A G C T A C T G A C G T C A G T C A T G A G T C G T A C A C G T
A C G T A C G T A C G T A C G T T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCCTCCTCCTGTTGCM
ACCACATCCTGT----
 G T A C A T G C A G T C C G A T A T G C A G T C A C G T A G T C G T A C A G C T A C T G A C G T C A G T C A T G A G T C G T A C
T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCCTCCTCCTGTTGCM
GGCCYCCTGCTGDGH--
 A C G T G T A C A T G C A G T C C G A T A T G C A G T C A C G T A G T C G T A C A G C T A C T G A C G T C A G T C A T G A G T C G T A C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCCTCCTCCTGTTGCM-
--ANCCACCTGTTGCNC
 G T A C A T G C A G T C C G A T A T G C A G T C A C G T A G T C G T A C A G C T A C T G A C G T C A G T C A T G A G T C G T A C A C G T
A C G T A C G T C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

SP1/MA0079.3/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCCTCCTCCTGTTGCM
GCCCCGCCCCC-------
 A C G T A C G T G T A C A T G C A G T C C G A T A T G C A G T C A C G T A G T C G T A C A G C T A C T G A C G T C A G T C A T G A G T C G T A C
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF263/MA0528.1/Jaspar

Match Rank:8
Score:0.55
Offset:-12
Orientation:reverse strand
Alignment:------------CCCTCCTCCTGTTGCM
TCCTCCTCCCCCTCCTCCTCC-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C A T G C A G T C C G A T A T G C A G T C A C G T A G T C G T A C A G C T A C T G A C G T C A G T C A T G A G T C G T A C
G A C T G A T C G A T C G A C T G A T C G A T C G A C T A G T C G A T C G A T C G A T C A G T C A G C T A G T C G T A C C G A T A T G C G T A C G A C T A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCCTCCTCCTGTTGCM
---ACTTCCTGTT---
 G T A C A T G C A G T C C G A T A T G C A G T C A C G T A G T C G T A C A G C T A C T G A C G T C A G T C A T G A G T C G T A C
A C G T A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCCTCCTCCTGTTGCM
-NNTCCTGCTGTGNNN
 G T A C A T G C A G T C C G A T A T G C A G T C A C G T A G T C G T A C A G C T A C T G A C G T C A G T C A T G A G T C G T A C
A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C