Information for 16-CCTTTGCAGGCAA (Motif 28)

A T G C A G T C A C G T A C G T A C G T A C T G A T G C C G T A A C T G A C T G A T G C C G T A C G T A
Reverse Opposite:
C G A T A C G T A T C G A G T C G T A C A C G T A T C G G T A C G T C A G T C A C G T A A C T G A T C G
p-value:1e-9
log p-value:-2.157e+01
Information Content per bp:1.834
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets49.0 +/- 31.5bp
Average Position of motif in Background27.7 +/- 6.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bcl6/MA0463.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CCTTTGCAGGCAA
NGCTTTCTAGGAAN
 A C G T A T G C A G T C A C G T A C G T A C G T A C T G A T G C C G T A A C T G A C T G A T G C C G T A C G T A
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCTTTGCAGGCAA
NNNCTTTCCAGGAAA
 A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G A T G C C G T A A C T G A C T G A T G C C G T A C G T A
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CCTTTGCAGGCAA
---TBGCACGCAA
 A T G C A G T C A C G T A C G T A C G T A C T G A T G C C G T A A C T G A C T G A T G C C G T A C G T A
A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

STAT3/MA0144.2/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCTTTGCAGGCAA-
---CTTCTGGGAAA
 A T G C A G T C A C G T A C G T A C G T A C T G A T G C C G T A A C T G A C T G A T G C C G T A C G T A A C G T
A C G T A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCTTTGCAGGCAA---
-ATTTGCATACAATGG
 A T G C A G T C A C G T A C G T A C G T A C T G A T G C C G T A A C T G A C T G A T G C C G T A C G T A A C G T A C G T A C G T
A C G T G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CCTTTGCAGGCAA----
------AAGGCAAGTGT
 A T G C A G T C A C G T A C G T A C G T A C T G A T G C C G T A A C T G A C T G A T G C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCTTTGCAGGCAA
-CTGTTCCTGG--
 A T G C A G T C A C G T A C G T A C G T A C T G A T G C C G T A A C T G A C T G A T G C C G T A C G T A
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCTTTGCAGGCAA---
TCTTTCGAGGAATTTG
 A T G C A G T C A C G T A C G T A C G T A C T G A T G C C G T A A C T G A C T G A T G C C G T A C G T A A C G T A C G T A C G T
C G A T G A T C G A C T C G A T C G A T A G T C A C T G C G T A T C A G C A T G C G T A G C T A G A C T G C A T G A C T T A C G

STAT1/MA0137.3/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CCTTTGCAGGCAA-
---TTTCCAGGAAA
 A T G C A G T C A C G T A C G T A C G T A C T G A T G C C G T A A C T G A C T G A T G C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CCTTTGCAGGCAA
GGGGCTYGKCTGGGA-
 A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G A T G C C G T A A C T G A C T G A T G C C G T A C G T A
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T