Information for 13-TTTATAGAGTGAG (Motif 24)

A C G T A C G T A G C T G T C A A G C T C G T A C T A G C G T A A C T G A C G T A C T G C T G A A C T G
Reverse Opposite:
G T A C A G C T G T A C C G T A G T A C A C G T A G T C A C G T C T G A A C G T C T G A C G T A C G T A
p-value:1e-9
log p-value:-2.187e+01
Information Content per bp:1.838
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.2 +/- 15.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL012.1_TATA-Box/Jaspar

Match Rank:1
Score:0.58
Offset:-8
Orientation:reverse strand
Alignment:--------TTTATAGAGTGAG
NNNNNNCTTTTATAN------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G T C A A G C T C G T A C T A G C G T A A C T G A C G T A C T G C T G A A C T G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:2
Score:0.58
Offset:-8
Orientation:reverse strand
Alignment:--------TTTATAGAGTGAG
NNNNNNCTTTTATAN------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G T C A A G C T C G T A C T A G C G T A A C T G A C G T A C T G C T G A A C T G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:3
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TTTATAGAGTGAG-
----TTRAGTGSYK
 A C G T A C G T A G C T G T C A A G C T C G T A C T A G C G T A A C T G A C G T A C T G C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:4
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TTTATAGAGTGAG
DGWTTTATGRCN----
 A C G T A C G T A C G T A C G T A C G T A G C T G T C A A G C T C G T A C T A G C G T A A C T G A C G T A C T G C T G A A C T G
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TTTATAGAGTGAG
NNANTTTTATTGGNNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G T C A A G C T C G T A C T A G C G T A A C T G A C G T A C T G C T G A A C T G
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TTTATAGAGTGAG
TCTATTTTTAGA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T G T C A A G C T C G T A C T A G C G T A A C T G A C G T A C T G C T G A A C T G
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A A C G T A C G T A C G T A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TTTATAGAGTGAG
TCTATTTATAGN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T G T C A A G C T C G T A C T A G C G T A A C T G A C G T A C T G C T G A A C T G
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T A C G T A C G T A C G T A C G T A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----TTTATAGAGTGAG
CBTGTTTAYAWW-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T G T C A A G C T C G T A C T A G C G T A A C T G A C G T A C T G C T G A A C T G
A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T A C G T A C G T A C G T A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:9
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----TTTATAGAGTGAG
NNAATTTTATTGGNTN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G T C A A G C T C G T A C T A G C G T A A C T G A C G T A C T G C T G A A C T G
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TTTATAGAGTGAG
CCTTTTATAGNC----
 A C G T A C G T A C G T A C G T A C G T A G C T G T C A A G C T C G T A C T A G C G T A A C T G A C G T A C T G C T G A A C T G
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C A C G T A C G T A C G T A C G T