Information for 11-CTCCGTGATA (Motif 22)

G T A C A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C G T G T C A
Reverse Opposite:
A C G T G T C A C G A T A G T C C G T A A G T C A C T G A C T G C G T A A C T G
p-value:1e-9
log p-value:-2.187e+01
Information Content per bp:1.891
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.4 +/- 27.8bp
Average Position of motif in Background48.1 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTCCGTGATA
GCTCCG-----
 A C G T G T A C A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C G T G T C A
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTCCGTGATA
--NCGTGACN
 G T A C A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C G T G T C A
A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTCCGTGATA
TTGCGTGCVA
 G T A C A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C G T G T C A
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTCCGTGATA
GGGTACGTGC--
 A C G T A C G T G T A C A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C G T G T C A
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTCCGTGATA
-TGCGTG---
 G T A C A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C G T G T C A
A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTCCGTGATA
NCACGTGACN
 G T A C A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C G T G T C A
A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTCCGTGATA
RTACGTGC--
 G T A C A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C G T G T C A
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTCCGTGATA
-TACGTGCV-
 G T A C A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C G T G T C A
A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTCCGTGATA
GGACGTGC--
 G T A C A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C G T G T C A
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T

Atf1/MA0604.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTCCGTGATA
-TACGTCAT-
 G T A C A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C G T G T C A
A C G T A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T A C G T