Information for 3-TMAGCCACAGCYCAGG (Motif 13)

A C G T G T A C C G T A A T C G G T A C A G T C C G T A G T A C C T G A C T A G A G T C A G C T A G T C C G T A A C T G A T C G
Reverse Opposite:
A T G C G T A C A C G T A C T G T C G A A C T G A G T C A G C T A C T G A C G T A C T G A C T G A T G C A C G T A C T G G T C A
p-value:1e-11
log p-value:-2.635e+01
Information Content per bp:1.839
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets67.0 +/- 18.4bp
Average Position of motif in Background93.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:TMAGCCACAGCYCAGG--
--------TGCCCAGNHW
 A C G T G T A C C G T A A T C G G T A C A G T C C G T A G T A C C T G A C T A G A G T C A G C T A G T C C G T A A C T G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TMAGCCACAGCYCAGG
-AAACCACAGAN----
 A C G T G T A C C G T A A T C G G T A C A G T C C G T A G T A C C T G A C T A G A G T C A G C T A G T C C G T A A C T G A T C G
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TMAGCCACAGCYCAGG
-AAACCACAGC-----
 A C G T G T A C C G T A A T C G G T A C A G T C C G T A G T A C C T G A C T A G A G T C A G C T A G T C C G T A A C T G A T C G
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TMAGCCACAGCYCAGG
RGGTCADNNAGAGGTCAV-
 A C G T A C G T A C G T A C G T G T A C C G T A A T C G G T A C A G T C C G T A G T A C C T G A C T A G A G T C A G C T A G T C C G T A A C T G A T C G
C T G A C A T G A C T G A C G T A T G C C G T A C A T G T A C G A T G C G C T A T A C G C T G A C T A G A C T G A C G T A T G C C G T A T A G C A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TMAGCCACAGCYCAGG
-AAACCACANN-----
 A C G T G T A C C G T A A T C G G T A C A G T C C G T A G T A C C T G A C T A G A G T C A G C T A G T C C G T A A C T G A T C G
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TMAGCCACAGCYCAGG
-----CACAGN-----
 A C G T G T A C C G T A A T C G G T A C A G T C C G T A G T A C C T G A C T A G A G T C A G C T A G T C C G T A A C T G A T C G
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TMAGCCACAGCYCAGG
-----CAAAGGTCAG-
 A C G T G T A C C G T A A T C G G T A C A G T C C G T A G T A C C T G A C T A G A G T C A G C T A G T C C G T A A C T G A T C G
A C G T A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T

RARA::RXRA/MA0159.1/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TMAGCCACAGCYCAGG
AGGTCACGGAGAGGTCA--
 A C G T A C G T A C G T A C G T G T A C C G T A A T C G G T A C A G T C C G T A G T A C C T G A C T A G A G T C A G C T A G T C C G T A A C T G A T C G
C T G A A C T G C A T G A C G T A T G C C T G A A G C T T A C G T C A G C T G A T A C G T C G A A C T G A C T G C A G T A T G C C G T A A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TMAGCCACAGCYCAGG
-AAATCACAGCA----
 A C G T G T A C C G T A A T C G G T A C A G T C C G T A G T A C C T G A C T A G A G T C A G C T A G T C C G T A A C T G A T C G
A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TMAGCCACAGCYCAGG-
--TGACANARRCCAGRC
 A C G T G T A C C G T A A T C G G T A C A G T C C G T A G T A C C T G A C T A G A G T C A G C T A G T C C G T A A C T G A T C G A C G T
A C G T A C G T C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C