Information for 4-GGAGATCCCTCCG (Motif 7)

A C T G C T A G C G T A A C T G C G T A A G C T A T G C A G T C A G T C A C G T A T G C G T A C A C T G
Reverse Opposite:
G T A C A C T G A T C G C G T A A C T G A C T G A T C G C T G A C G A T G T A C A C G T A G T C T A G C
p-value:1e-11
log p-value:-2.674e+01
Information Content per bp:1.817
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.1 +/- 25.1bp
Average Position of motif in Background60.2 +/- 22.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGAGATCCCTCCG
GGGAAATCCCCN--
 A C G T A C T G C T A G C G T A A C T G C G T A A G C T A T G C A G T C A G T C A C G T A T G C G T A C A C T G
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGAGATCCCTCCG
GGAAANCCCC---
 A C T G C T A G C G T A A C T G C G T A A G C T A T G C A G T C A G T C A C G T A T G C G T A C A C T G
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGAGATCCCTCCG
GGAAATTCCC---
 A C T G C T A G C G T A A C T G C G T A A G C T A T G C A G T C A G T C A C G T A T G C G T A C A C T G
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGAGATCCCTCCG
GGAAATCCCC---
 A C T G C T A G C G T A A C T G C G T A A G C T A T G C A G T C A G T C A C G T A T G C G T A C A C T G
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGAGATCCCTCCG
AGGGGATTCCCCT---
 A C G T A C G T A C G T A C T G C T A G C G T A A C T G C G T A A G C T A T G C A G T C A G T C A C G T A T G C G T A C A C T G
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGAGATCCCTCCG
GGGGATTCCCCC-
 A C T G C T A G C G T A A C T G C G T A A G C T A T G C A G T C A G T C A C G T A T G C G T A C A C T G
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGAGATCCCTCCG-----
-AAATTCCCCCCGGAAGT
 A C T G C T A G C G T A A C T G C G T A A G C T A T G C A G T C A G T C A C G T A T G C G T A C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T

NFKB1/MA0105.4/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGAGATCCCTCCG
AGGGGATTCCCCT---
 A C G T A C G T A C G T A C T G C T A G C G T A A C T G C G T A A G C T A T G C A G T C A G T C A C G T A T G C G T A C A C T G
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGAGATCCCTCCG
-AAGACCCYYN--
 A C T G C T A G C G T A A C T G C G T A A G C T A T G C A G T C A G T C A C G T A T G C G T A C A C T G
A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGAGATCCCTCCG
GGAAATTCCC---
 A C T G C T A G C G T A A C T G C G T A A G C T A T G C A G T C A G T C A C G T A T G C G T A C A C T G
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T