Information for 5-CAACAGACAYACCCAA (Motif 6)

G T A C G T C A C T G A A G T C C G T A T A C G C G T A T G A C G C T A A G T C G T C A A G T C G A T C T G A C C G T A T G C A
Reverse Opposite:
A C G T G A C T A C T G C A T G C T A G A C G T T C A G C G A T A C T G A C G T A T G C G A C T C T A G G A C T A C G T A C T G
p-value:1e-11
log p-value:-2.745e+01
Information Content per bp:1.681
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif16.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets47.0 +/- 24.5bp
Average Position of motif in Background49.8 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CAACAGACAYACCCAA
AGCAACAGCCGCACC---
 A C G T A C G T G T A C G T C A C T G A A G T C C G T A T A C G C G T A T G A C G C T A A G T C G T C A A G T C G A T C T G A C C G T A T G C A
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAACAGACAYACCCAA
AGCGGCACACACGCAA--
 A C G T A C G T G T A C G T C A C T G A A G T C C G T A T A C G C G T A T G A C G C T A A G T C G T C A A G T C G A T C T G A C C G T A T G C A
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CAACAGACAYACCCAA
----GGCCACACCCAN
 G T A C G T C A C T G A A G T C C G T A T A C G C G T A T G A C G C T A A G T C G T C A A G T C G A T C T G A C C G T A T G C A
A C G T A C G T A C G T A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CAACAGACAYACCCAA
----GGACACACCCCC
 G T A C G T C A C T G A A G T C C G T A T A C G C G T A T G A C G C T A A G T C G T C A A G T C G A T C T G A C C G T A T G C A
A C G T A C G T A C G T A C G T T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CAACAGACAYACCCAA
--CCAGACRSVB----
 G T A C G T C A C T G A A G T C C G T A T A C G C G T A T G A C G C T A A G T C G T C A A G T C G A T C T G A C C G T A T G C A
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CAACAGACAYACCCAA
-----GCCACACCCA-
 G T A C G T C A C T G A A G T C C G T A T A C G C G T A T G A C G C T A A G T C G T C A A G T C G A T C T G A C C G T A T G C A
A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T

Klf1/MA0493.1/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CAACAGACAYACCCAA
----GGCCACACCCA-
 G T A C G T C A C T G A A G T C C G T A T A C G C G T A T G A C G C T A A G T C G T C A A G T C G A T C T G A C C G T A T G C A
A C G T A C G T A C G T A C G T C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CAACAGACAYACCCAA
--CCAGACAG------
 G T A C G T C A C T G A A G T C C G T A T A C G C G T A T G A C G C T A A G T C G T C A A G T C G A T C T G A C C G T A T G C A
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CAACAGACAYACCCAA
--BCAGACWA------
 G T A C G T C A C T G A A G T C C G T A T A C G C G T A T G A C G C T A A G T C G T C A A G T C G A T C T G A C C G T A T G C A
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CAACAGACAYACCCAA
AAACAAACATTC----
 G T A C G T C A C T G A A G T C C G T A T A C G C G T A T G A C G C T A A G T C G T C A A G T C G A T C T G A C C G T A T G C A
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T A C G T A C G T