Information for 2-GTGGGCCCATAGCAAT (Motif 3)

A C T G A G C T A C T G C T A G A C T G A T G C G T A C G T A C C G T A G C A T C T G A A T C G A T G C G T C A G T C A G C A T
Reverse Opposite:
C G T A A C G T C A G T A T C G A T G C G A C T C G T A A C G T A C T G A C T G A T C G G T A C G A T C A G T C C T G A A G T C
p-value:1e-13
log p-value:-3.156e+01
Information Content per bp:1.876
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.6 +/- 31.0bp
Average Position of motif in Background62.3 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTGGGCCCATAGCAAT
GTGGGCCCCA------
 A C T G A G C T A C T G C T A G A C T G A T G C G T A C G T A C C G T A G C A T C T G A A T C G A T G C G T C A G T C A G C A T
T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GTGGGCCCATAGCAAT---
----TACCATAGCAACGGT
 A C T G A G C T A C T G C T A G A C T G A T G C G T A C G T A C C G T A G C A T C T G A A T C G A T G C G T C A G T C A G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

Rfx1/MA0509.1/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GTGGGCCCATAGCAAT
--GTTGCCATGGCAAC
 A C T G A G C T A C T G C T A G A C T G A T G C G T A C G T A C C G T A G C A T C T G A A T C G A T G C G T C A G T C A G C A T
A C G T A C G T C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GTGGGCCCATAGCAAT---
----CCGCATAGCAACGGA
 A C T G A G C T A C T G C T A G A C T G A T G C G T A C G T A C C G T A G C A T C T G A A T C G A T G C G T C A G T C A G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GTGGGCCCATAGCAAT-------
TGTGACCCTTAGCAACCGATTAA
 A C T G A G C T A C T G C T A G A C T G A T G C G T A C G T A C C G T A G C A T C T G A A T C G A T G C G T C A G T C A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GTGGGCCCATAGCAAT
-NGTTGCCATGGCAA-
 A C T G A G C T A C T G C T A G A C T G A T G C G T A C G T A C C G T A G C A T C T G A A T C G A T G C G T C A G T C A G C A T
A C G T A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A C G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GTGGGCCCATAGCAAT
-GGTTGCCATGGCAA-
 A C T G A G C T A C T G C T A G A C T G A T G C G T A C G T A C C G T A G C A T C T G A A T C G A T G C G T C A G T C A G C A T
A C G T C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----GTGGGCCCATAGCAAT
TTGGGGGCGCCCCTAG----
 A C G T A C G T A C G T A C G T A C T G A G C T A C T G C T A G A C T G A T G C G T A C G T A C C G T A G C A T C T G A A T C G A T G C G T C A G T C A G C A T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G A C G T A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.51
Offset:6
Orientation:forward strand
Alignment:GTGGGCCCATAGCAAT--
------SCCTAGCAACAG
 A C T G A G C T A C T G C T A G A C T G A T G C G T A C G T A C C G T A G C A T C T G A A T C G A T G C G T C A G T C A G C A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PB0133.1_Hic1_2/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GTGGGCCCATAGCAAT
GGGTGTGCCCAAAAGG--
 A C G T A C G T A C T G A G C T A C T G C T A G A C T G A T G C G T A C G T A C C G T A G C A T C T G A A T C G A T G C G T C A G T C A G C A T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G A C G T A C G T