Information for 6-TGDGAAGTGTTTT (Motif 6)

C G A T A C T G C A T G C A T G C G T A C T G A A C T G A C G T C T A G A C G T A C G T A C G T A G C T
Reverse Opposite:
C T G A C G T A C G T A C G T A A G T C C G T A A G T C A G C T A C G T G T A C G T A C G T A C C G T A
p-value:1e-11
log p-value:-2.535e+01
Information Content per bp:1.863
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif9.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.4 +/- 22.1bp
Average Position of motif in Background65.4 +/- 18.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TGDGAAGTGTTTT
--TTAAGTGCTT-
 C G A T A C T G C A T G C A T G C G T A C T G A A C T G A C G T C T A G A C G T A C G T A C G T A G C T
A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TGDGAAGTGTTTT
--TTRAGTGSYK-
 C G A T A C T G C A T G C A T G C G T A C T G A A C T G A C G T C T A G A C G T A C G T A C G T A G C T
A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TGDGAAGTGTTTT
-NTCAAGTGGN--
 C G A T A C T G C A T G C A T G C G T A C T G A A C T G A C G T C T A G A C G T A C G T A C G T A G C T
A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TGDGAAGTGTTTT
--TTAAGTGGN--
 C G A T A C T G C A T G C A T G C G T A C T G A A C T G A C G T C T A G A C G T A C G T A C G T A G C T
A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGDGAAGTGTTTT-
AATTTCAAGTGGCTTN
 A C G T A C G T C G A T A C T G C A T G C A T G C G T A C T G A A C T G A C G T C T A G A C G T A C G T A C G T A G C T A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

PH0004.1_Nkx3-2/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGDGAAGTGTTTT--
NTNNTTAAGTGGTTANN
 A C G T A C G T C G A T A C T G C A T G C A T G C G T A C T G A A C T G A C G T C T A G A C G T A C G T A C G T A G C T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

Nkx3-1/MA0124.2/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TGDGAAGTGTTTT
--TTAAGTGGT--
 C G A T A C T G C A T G C A T G C G T A C T G A A C T G A C G T C T A G A C G T A C G T A C G T A G C T
A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGDGAAGTGTTTT-
AATNTTAAGTGGNTNN
 A C G T A C G T C G A T A C T G C A T G C A T G C G T A C T G A A C T G A C G T C T A G A C G T A C G T A C G T A G C T A C G T
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGDGAAGTGTTTT
-NTCAAGTGG---
 C G A T A C T G C A T G C A T G C G T A C T G A A C T G A C G T C T A G A C G T A C G T A C G T A G C T
A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGDGAAGTGTTTT--
-NNGTANTGTTTTNC
 C G A T A C T G C A T G C A T G C G T A C T G A A C T G A C G T C T A G A C G T A C G T A C G T A G C T A C G T A C G T
A C G T G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C