Information for 5-CAACTYGCCTCTC (Motif 5)

A T G C C G T A C G T A A G T C A C G T A G T C A T C G A T G C A G T C A C G T A G T C A G C T A T G C
Reverse Opposite:
A T C G C T G A A C T G C G T A A C T G A T C G A T G C C T A G C G T A A C T G A C G T A C G T A T C G
p-value:1e-11
log p-value:-2.704e+01
Information Content per bp:1.858
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.7 +/- 15.5bp
Average Position of motif in Background60.4 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CAACTYGCCTCTC
NNACTTGCCTT--
 A T G C C G T A C G T A A G T C A C G T A G T C A T C G A T G C A G T C A C G T A G T C A G C T A T G C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CAACTYGCCTCTC
NNACTTACCTN--
 A T G C C G T A C G T A A G T C A C G T A G T C A T C G A T G C A G T C A C G T A G T C A G C T A T G C
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:3
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CAACTYGCCTCTC
CGACCAACTGCCGTG--
 A C G T A C G T A C G T A C G T A T G C C G T A C G T A A G T C A C G T A G T C A T C G A T G C A G T C A C G T A G T C A G C T A T G C
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:4
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CAACTYGCCTCTC
CGACCAACTGCCATGC-
 A C G T A C G T A C G T A C G T A T G C C G T A C G T A A G T C A C G T A G T C A T C G A T G C A G T C A C G T A G T C A G C T A T G C
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CAACTYGCCTCTC-
AGAAATGACTTCCCT
 A C G T A T G C C G T A C G T A A G T C A C G T A G T C A T C G A T G C A G T C A C G T A G T C A G C T A T G C A C G T
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:6
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-CAACTYGCCTCTC
CCAACTGCCA----
 A C G T A T G C C G T A C G T A A G T C A C G T A G T C A T C G A T G C A G T C A C G T A G T C A G C T A T G C
A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:7
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:CAACTYGCCTCTC---
------NSCACTYVAV
 A T G C C G T A C G T A A G T C A C G T A G T C A T C G A T G C A G T C A C G T A G T C A G C T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:8
Score:0.48
Offset:2
Orientation:forward strand
Alignment:CAACTYGCCTCTC-
--ACTTTCGTTTCT
 A T G C C G T A C G T A A G T C A C G T A G T C A T C G A T G C A G T C A C G T A G T C A G C T A T G C A C G T
A C G T A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.47
Offset:5
Orientation:forward strand
Alignment:CAACTYGCCTCTC---
-----AGCCACTCAAG
 A T G C C G T A C G T A A G T C A C G T A G T C A T C G A T G C A G T C A C G T A G T C A G C T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

PB0140.1_Irf6_2/Jaspar

Match Rank:10
Score:0.47
Offset:4
Orientation:forward strand
Alignment:CAACTYGCCTCTC------
----ACCACTCTCGGTCAC
 A T G C C G T A C G T A A G T C A C G T A G T C A T C G A T G C A G T C A C G T A G T C A G C T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C