Information for 5-GAAGAYYARGKGGSSW (Motif 12)

A C T G C G T A C G T A C T A G T G C A A G C T A G C T C T G A C T A G T A C G A C T G A C T G C T A G A T C G T A C G C G A T
Reverse Opposite:
C G T A A T G C A T G C A G T C A G T C G T A C A T G C A G T C A G C T C T G A T C G A A C G T A G T C A C G T A C G T A G T C
p-value:1e-9
log p-value:-2.230e+01
Information Content per bp:1.733
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif15.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets58.6 +/- 20.2bp
Average Position of motif in Background50.7 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GAAGAYYARGKGGSSW
NGAAGC-----------
 A C G T A C T G C G T A C G T A C T A G T G C A A G C T A G C T C T G A C T A G T A C G A C T G A C T G C T A G A T C G T A C G C G A T
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAAGAYYARGKGGSSW
AAAGATCAAAGG----
 A C T G C G T A C G T A C T A G T G C A A G C T A G C T C T G A C T A G T A C G A C T G A C T G C T A G A T C G T A C G C G A T
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T A C G T A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GAAGAYYARGKGGSSW
AAAGATCAAAGGGTT-
 A C T G C G T A C G T A C T A G T G C A A G C T A G C T C T G A C T A G T A C G A C T G A C T G C T A G A T C G T A C G C G A T
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GAAGAYYARGKGGSSW-
-AANTTCAAGTGGCTTN
 A C T G C G T A C G T A C T A G T G C A A G C T A G C T C T G A C T A G T A C G A C T G A C T G C T A G A T C G T A C G C G A T A C G T
A C G T C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:5
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GAAGAYYARGKGGSSW-
--ATTTTNGGGGGGCNN
 A C T G C G T A C G T A C T A G T G C A A G C T A G C T C T G A C T A G T A C G A C T G A C T G C T A G A T C G T A C G C G A T A C G T
A C G T A C G T T C G A C A G T G C A T C G A T C G A T C G A T C A T G C T A G A C T G A C T G A C T G A T C G A G T C G A C T G A C T

PH0115.1_Nkx2-6/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GAAGAYYARGKGGSSW-
-AATNTTAAGTGGNTNN
 A C T G C G T A C G T A C T A G T G C A A G C T A G C T C T G A C T A G T A C G A C T G A C T G C T A G A T C G T A C G C G A T A C G T
A C G T C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

PH0114.1_Nkx2-5/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GAAGAYYARGKGGSSW-
-AAATTCAAGTGGNTTN
 A C T G C G T A C G T A C T A G T G C A A G C T A G C T C T G A C T A G T A C G A C T G A C T G C T A G A T C G T A C G C G A T A C G T
A C G T C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

MF0001.1_ETS_class/Jaspar

Match Rank:8
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----GAAGAYYARGKGGSSW
ACCGGAAG------------
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A C T A G T G C A A G C T A G C T C T G A C T A G T A C G A C T G A C T G C T A G A T C G T A C G C G A T
C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GAAGAYYARGKGGSSW
AAGAGGATTAG-------
 A C G T A C G T A C T G C G T A C G T A C T A G T G C A A G C T A G C T C T G A C T A G T A C G A C T G A C T G C T A G A T C G T A C G C G A T
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GAAGAYYARGKGGSSW
TGGAAAA-----------
 A C G T A C G T A C T G C G T A C G T A C T A G T G C A A G C T A G C T C T G A C T A G T A C G A C T G A C T G C T A G A T C G T A C G C G A T
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T