Information for 3-GMGAASASSMWGAACC (Motif 9)

A C T G G T C A C T A G C G T A C G T A A T C G C G T A A T G C A T G C G T C A C G A T A C T G C T G A C G T A A G T C A G T C
Reverse Opposite:
A C T G C T A G A C G T A G C T A G T C C G T A A C G T A T C G A T C G A C G T T A G C A C G T A C G T A G T C A C G T A G T C
p-value:1e-10
log p-value:-2.520e+01
Information Content per bp:1.843
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 33.0bp
Average Position of motif in Background44.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Vdr/MA0693.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GMGAASASSMWGAACC-
-TGAACTCNATGAACTC
 A C T G G T C A C T A G C G T A C G T A A T C G C G T A A T G C A T G C G T C A C G A T A C T G C T G A C G T A A G T C A G T C A C G T
A C G T G A C T T C A G T G C A T G C A G A T C A G C T A G T C C T G A C T G A G A C T T C A G T G C A T G C A G T A C A G C T A G T C

Ar/MA0007.3/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GMGAASASSMWGAACC-
GGGAACACGGTGTACCC
 A C T G G T C A C T A G C G T A C G T A A T C G C G T A A T G C A T G C G T C A C G A T A C T G C T G A C G T A A G T C A G T C A C G T
C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C

NR3C1/MA0113.3/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GMGAASASSMWGAACC-
NGGAACATNATGTACCC
 A C T G G T C A C T A G C G T A C G T A A T C G C G T A A T G C A T G C G T C A C G A T A C T G C T G A C G T A A G T C A G T C A C G T
C A T G C T A G C T A G C G T A T G C A T A G C C T G A G A C T G C A T C T G A G A C T A T C G G C A T G C T A G A T C G A T C G A T C

NR3C2/MA0727.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GMGAASASSMWGAACC-
GGGAACACAATGTTCCC
 A C T G G T C A C T A G C G T A C G T A A T C G C G T A A T G C A T G C G T C A C G A T A C T G C T G A C G T A A G T C A G T C A C G T
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

RXRA::VDR/MA0074.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GMGAASASSMWGAACC
-TGAACCCGATGACCC
 A C T G G T C A C T A G C G T A C G T A A T C G C G T A A T G C A T G C G T C A C G A T A C T G C T G A C G T A A G T C A G T C
A C G T A G C T C T A G C G T A C G T A A G T C A G C T A G T C A C T G C G A T A G C T C T A G C G T A G T A C A G T C A G T C

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GMGAASASSMWGAACC
NAGAACAGNCTGTNCT
 A C T G G T C A C T A G C G T A C G T A A T C G C G T A A T G C A T G C G T C A C G A T A C T G C T G A C G T A A G T C A G T C
T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GMGAASASSMWGAACC
NAGNACANNNTGTNCT
 A C T G G T C A C T A G C G T A C G T A A T C G C G T A A T G C A T G C G T C A C G A T A C T G C T G A C G T A A G T C A G T C
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GMGAASASSMWGAACC
VAGRACAKWCTGTYC-
 A C T G G T C A C T A G C G T A C G T A A T C G C G T A A T G C A T G C G T C A C G A T A C T G C T G A C G T A A G T C A G T C
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GMGAASASSMWGAACC
AAGAACATWHTGTTC-
 A C T G G T C A C T A G C G T A C G T A A T C G C G T A A T G C A T G C G T C A C G A T A C T G C T G A C G T A A G T C A G T C
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GMGAASASSMWGAACC
VAGRACAKNCTGTBC-
 A C T G G T C A C T A G C G T A C G T A A T C G C G T A A T G C A T G C G T C A C G A T A C T G C T G A C G T A A G T C A G T C
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C A C G T