Information for 4-CGGCCGACCTGAC (Motif 7)

G A T C A T C G A C T G A G T C A T G C A C T G G T C A A G T C A G T C G C A T A C T G C T G A A T G C
Reverse Opposite:
A T C G A G C T A G T C C G T A C T A G A C T G A C G T A G T C A T C G A C T G A G T C A T G C C T A G
p-value:1e-11
log p-value:-2.590e+01
Information Content per bp:1.797
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.3 +/- 21.6bp
Average Position of motif in Background38.7 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CGGCCGACCTGAC
NCGCGGACGTTG-
 G A T C A T C G A C T G A G T C A T G C A C T G G T C A A G T C A G T C G C A T A C T G C T G A A T G C
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:2
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CGGCCGACCTGAC
--CCTCACCTG--
 G A T C A T C G A C T G A G T C A T G C A C T G G T C A A G T C A G T C G C A T A C T G C T G A A T G C
A C G T A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:3
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CGGCCGACCTGAC--
AGGNCANNGTGACCT
 G A T C A T C G A C T G A G T C A T G C A C T G G T C A A G T C A G T C G C A T A C T G C T G A A T G C A C G T A C G T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:CGGCCGACCTGAC--
-------CCAGACAG
 G A T C A T C G A C T G A G T C A T G C A C T G G T C A A G T C A G T C G C A T A C T G C T G A A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

PB0110.1_Bcl6b_2/Jaspar

Match Rank:5
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CGGCCGACCTGAC--
ATCCCCGCCCCTAAAA
 A C G T G A T C A T C G A C T G A G T C A T G C A C T G G T C A A G T C A G T C G C A T A C T G C T G A A T G C A C G T A C G T
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CGGCCGACCTGAC---
-GGTCANNGTGACCTN
 G A T C A T C G A C T G A G T C A T G C A C T G G T C A A G T C A G T C G C A T A C T G C T G A A T G C A C G T A C G T A C G T
A C G T C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:7
Score:0.48
Offset:4
Orientation:forward strand
Alignment:CGGCCGACCTGAC-
----CGTCTAGACA
 G A T C A T C G A C T G A G T C A T G C A C T G G T C A A G T C A G T C G C A T A C T G C T G A A T G C A C G T
A C G T A C G T A C G T A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A

PB0052.1_Plagl1_1/Jaspar

Match Rank:8
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---CGGCCGACCTGAC
TTGGGGGCGCCCCTAG
 A C G T A C G T A C G T G A T C A T C G A C T G A G T C A T G C A C T G G T C A A G T C A G T C G C A T A C T G C T G A A T G C
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.48
Offset:7
Orientation:reverse strand
Alignment:CGGCCGACCTGAC----
-------CCAGACRSVB
 G A T C A T C G A C T G A G T C A T G C A C T G G T C A A G T C A G T C G C A T A C T G C T G A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

YY1(Zf)/Promoter/Homer

Match Rank:10
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-CGGCCGACCTGAC
GCCGCCATCTTG--
 A C G T G A T C A T C G A C T G A G T C A T G C A C T G G T C A A G T C A G T C G C A T A C T G C T G A A T G C
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T