Information for 4-TGTTTTTATAACTTGC (Motif 19)

A C G T A T C G A C G T A C G T A G C T A C G T A C G T C G T A A C G T C G T A C G T A A G T C A C G T A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A C G T A A C T G A C G T A C G T C G T A C G A T T G C A C G T A C T G A G T C A C G T A A T G C G T C A
p-value:1e-7
log p-value:-1.675e+01
Information Content per bp:1.917
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.8 +/- 30.0bp
Average Position of motif in Background76.3 +/- 4.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA10/MA0899.1/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGTTTTTATAACTTGC
--NTTTTATTACN---
 A C G T A T C G A C G T A C G T A G C T A C G T A C G T C G T A A C G T C G T A C G T A A G T C A C G T A C G T A C T G A G T C
A C G T A C G T C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C A C G T A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGTTTTTATAACTTGC
---TTTTATGGCTN--
 A C G T A T C G A C G T A C G T A G C T A C G T A C G T C G T A A C G T C G T A C G T A A G T C A C G T A C G T A C T G A G T C
A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGTTTTTATAACTTGC
--NTTTTATGAC----
 A C G T A T C G A C G T A C G T A G C T A C G T A C G T C G T A A C G T C G T A C G T A A G T C A C G T A C G T A C T G A G T C
A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T A C G T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGTTTTTATAACTTGC
NGANTTTTATGGCTCN-
 A C G T A C G T A T C G A C G T A C G T A G C T A C G T A C G T C G T A A C G T C G T A C G T A A G T C A C G T A C G T A C T G A G T C
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T A C G T

TBP/MA0108.2/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TGTTTTTATAACTTGC
NNNNNNCTTTTATAN-----
 A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C G T A G C T A C G T A C G T C G T A A C G T C G T A C G T A A G T C A C G T A C G T A C T G A G T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TGTTTTTATAACTTGC
NNNNNNCTTTTATAN-----
 A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C G T A G C T A C G T A C G T C G T A A C G T C G T A C G T A A G T C A C G T A C G T A C T G A G T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TGTTTTTATAACTTGC
---TTTTATTGC----
 A C G T A T C G A C G T A C G T A G C T A C G T A C G T C G T A A C G T C G T A C G T A A G T C A C G T A C G T A C T G A G T C
A C G T A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTTTTATAACTTGC
NNNNTTTTTTTTTNAAC----
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C G T A G C T A C G T A C G T C G T A A C G T C G T A C G T A A G T C A C G T A C G T A C T G A G T C
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C A C G T A C G T A C G T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGTTTTTATAACTTGC
NTGTTTAYATWW-----
 A C G T A C G T A T C G A C G T A C G T A G C T A C G T A C G T C G T A A C G T C G T A C G T A A G T C A C G T A C G T A C T G A G T C
C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A A C G T A C G T A C G T A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTTTATAACTTGC
NNTTTTGTTTTGATNT--
 A C G T A C G T A C G T A T C G A C G T A C G T A G C T A C G T A C G T C G T A A C G T C G T A C G T A A G T C A C G T A C G T A C T G A G T C
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T A C G T A C G T