Information for 7-AGGSAAGGCCMRS (Motif 12)

C T G A A C T G A C T G A T G C C G T A C G T A A C T G A C T G A G T C A G T C G T C A C T A G A T C G
Reverse Opposite:
A T G C A G T C A C G T A C T G A C T G A G T C A G T C A C G T A C G T A T C G T A G C A G T C A G C T
p-value:1e-8
log p-value:-2.061e+01
Information Content per bp:1.881
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif26.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets58.8 +/- 17.8bp
Average Position of motif in Background41.6 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.70
Offset:3
Orientation:forward strand
Alignment:AGGSAAGGCCMRS
---CAAGGHCANV
 C T G A A C T G A C T G A T G C C G T A C G T A A C T G A C T G A G T C A G T C G T C A C T A G A T C G
A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGGSAAGGCCMRS
AAGGCAAGTGT---
 A C G T C T G A A C T G A C T G A T G C C G T A C G T A A C T G A C T G A G T C A G T C G T C A C T A G A T C G
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGGSAAGGCCMRS
-NTCAAGGTCA--
 C T G A A C T G A C T G A T G C C G T A C G T A A C T G A C T G A G T C A G T C G T C A C T A G A T C G
A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.64
Offset:5
Orientation:forward strand
Alignment:AGGSAAGGCCMRS
-----AGGCCTNG
 C T G A A C T G A C T G A T G C C G T A C G T A A C T G A C T G A G T C A G T C G T C A C T A G A T C G
A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.63
Offset:5
Orientation:forward strand
Alignment:AGGSAAGGCCMRS
-----AGGCCTAG
 C T G A A C T G A C T G A T G C C G T A C G T A A C T G A C T G A G T C A G T C G T C A C T A G A T C G
A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGGSAAGGCCMRS
TGGGGAAGGGCM--
 A C G T C T G A A C T G A C T G A T G C C G T A C G T A A C T G A C T G A G T C A G T C G T C A C T A G A T C G
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGGSAAGGCCMRS
-BTCAAGGTCA--
 C T G A A C T G A C T G A T G C C G T A C G T A A C T G A C T G A G T C A G T C G T C A C T A G A T C G
A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGGSAAGGCCMRS
-GGAAATCCCC--
 C T G A A C T G A C T G A T G C C G T A C G T A A C T G A C T G A G T C A G T C G T C A C T A G A T C G
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGGSAAGGCCMRS
-GGAAATTCCC--
 C T G A A C T G A C T G A T G C C G T A C G T A A C T G A C T G A G T C A G T C G T C A C T A G A T C G
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGGSAAGGCCMRS
AAGTTCAAGGTCAGC
 A C G T A C G T C T G A A C T G A C T G A T G C C G T A C G T A A C T G A C T G A G T C A G T C G T C A C T A G A T C G
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C