Information for 9-TCACAGGGTGGTGGCA (Motif 7)

A C G T A G T C G T C A T A G C C G T A A C T G C T A G T A C G G A C T C A T G C A T G A C G T C A T G A C T G A T G C C G T A
Reverse Opposite:
G C A T A T C G T G A C G T A C T G C A G T A C G T A C C G T A A G T C A G T C G T A C A C G T A C T G A C G T T A C G T G C A
p-value:1e-12
log p-value:-2.890e+01
Information Content per bp:1.666
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif11.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets49.8 +/- 20.1bp
Average Position of motif in Background58.7 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI2/MA0734.1/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TCACAGGGTGGTGGCA
---CAGTGTGGTCGC-
 A C G T A G T C G T C A T A G C C G T A A C T G C T A G T A C G G A C T C A T G C A T G A C G T C A T G A C T G A T G C C G T A
A C G T A C G T A C G T G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C A C G T

Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TCACAGGGTGGTGGCA--
ANTTMRCASBNNNGTGYKAAN
 A C G T A C G T A C G T A C G T A G T C G T C A T A G C C G T A A C T G C T A G T A C G G A C T C A T G C A T G A C G T C A T G A C T G A T G C C G T A A C G T A C G T
C G T A C G A T G A C T G A C T T G A C C T G A A T G C C T G A T A G C A G T C A C G T T C G A C A T G T A C G G A C T A T C G G A C T A C G T C T G A T C G A C G T A

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----TCACAGGGTGGTGGCA
SMCAGTCWGAKGGAGGAGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A T A G C C G T A A C T G C T A G T A C G G A C T C A T G C A T G A C G T C A T G A C T G A T G C C G T A
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TCACAGGGTGGTGGCA
-CACAGN---------
 A C G T A G T C G T C A T A G C C G T A A C T G C T A G T A C G G A C T C A T G C A T G A C G T C A T G A C T G A T G C C G T A
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

T/MA0009.2/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TCACAGGGTGGTGGCA
TCACACCTAGGTGTGA
 A C G T A G T C G T C A T A G C C G T A A C T G C T A G T A C G G A C T C A T G C A T G A C G T C A T G A C T G A T G C C G T A
G A C T T G A C C T G A A G T C T C G A G A T C T G A C G A C T C G T A A C T G C T A G A G C T C T A G G A C T A C T G C T G A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TCACAGGGTGGTGGCA
HTTTCCCASG---------
 A C G T A C G T A C G T A C G T A G T C G T C A T A G C C G T A A C T G C T A G T A C G G A C T C A T G C A T G A C G T C A T G A C T G A T G C C G T A
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX19/MA0804.1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TCACAGGGTGGTGGCA--
TTTCACACCTAGGTGTGAAN
 A C G T A C G T A C G T A G T C G T C A T A G C C G T A A C T G C T A G T A C G G A C T C A T G C A T G A C G T C A T G A C T G A T G C C G T A A C G T A C G T
C G A T C G A T G A C T T G A C C T G A G A T C T C G A G A T C T G A C G A C T C G T A A C T G C T A G A G C T T C A G G A C T A C T G C T G A G T C A G C T A

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:TCACAGGGTGGTGGCA-
--------GGTTGGCAT
 A C G T A G T C G T C A T A G C C G T A A C T G C T A G T A C G G A C T C A T G C A T G A C G T C A T G A C T G A T G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TCACAGGGTGGTGGCA
GTCACATGAY-------
 A C G T A C G T A G T C G T C A T A G C C G T A A C T G C T A G T A C G G A C T C A T G C A T G A C G T C A T G A C T G A T G C C G T A
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:TCACAGGGTGGTGGCA
-CACAGCGGGGGGTC-
 A C G T A G T C G T C A T A G C C G T A A C T G C T A G T A C G G A C T C A T G C A T G A C G T C A T G A C T G A T G C C G T A
A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C A C G T