Information for 20-GGCCATGGCTGGAGGG (Motif 32)

A C T G A T C G A G T C G A T C G C T A A C G T C T A G C A T G A G T C C G A T A C T G A C T G T G C A C A T G T A C G T A C G
Reverse Opposite:
A T G C A T G C G A T C A C G T T G A C A G T C C G T A C T A G G T A C A G T C G T C A C A G T C A T G A C T G A T G C A G T C
p-value:1e-8
log p-value:-2.026e+01
Information Content per bp:1.704
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif20.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets49.6 +/- 33.9bp
Average Position of motif in Background45.8 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGCCATGGCTGGAGGG
-GTCATGCHTGRCTGS
 A C T G A T C G A G T C G A T C G C T A A C G T C T A G C A T G A G T C C G A T A C T G A C T G T G C A C A T G T A C G T A C G
A C G T A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGCCATGGCTGGAGGG
CAGGCCNNGGCCNN----
 A C G T A C G T A C T G A T C G A G T C G A T C G C T A A C G T C T A G C A T G A G T C C G A T A C T G A C T G T G C A C A T G T A C G T A C G
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGCCATGGCTGGAGGG
TGACCTTGAN-------
 A C G T A C T G A T C G A G T C G A T C G C T A A C G T C T A G C A T G A G T C C G A T A C T G A C T G T G C A C A T G T A C G T A C G
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GGCCATGGCTGGAGGG
----TWGTCTGV----
 A C T G A T C G A G T C G A T C G C T A A C G T C T A G C A T G A G T C C G A T A C T G A C T G T G C A C A T G T A C G T A C G
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGCCATGGCTGGAGGG
AGGCCTAG---------
 A C G T A C T G A T C G A G T C G A T C G C T A A C G T C T A G C A T G A G T C C G A T A C T G A C T G T G C A C A T G T A C G T A C G
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GGCCATGGCTGGAGGG
BNTGDCCTTG---------
 A C G T A C G T A C G T A C T G A T C G A G T C G A T C G C T A A C G T C T A G C A T G A G T C C G A T A C T G A C T G T G C A C A T G T A C G T A C G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGCCATGGCTGGAGGG
GGGGCTYGKCTGGGA--
 A C G T A C T G A T C G A G T C G A T C G C T A A C G T C T A G C A T G A G T C C G A T A C T G A C T G T G C A C A T G T A C G T A C G
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGCCATGGCTGGAGGG
NGTCACGCTTGGCTGC
 A C T G A T C G A G T C G A T C G C T A A C G T C T A G C A T G A G T C C G A T A C T G A C T G T G C A C A T G T A C G T A C G
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GGCCATGGCTGGAGGG
TGACCTTGAV-------
 A C G T A C T G A T C G A G T C G A T C G C T A A C G T C T A G C A T G A G T C C G A T A C T G A C T G T G C A C A T G T A C G T A C G
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GGCCATGGCTGGAGGG
----CTGTCTGG----
 A C T G A T C G A G T C G A T C G C T A A C G T C T A G C A T G A G T C C G A T A C T G A C T G T G C A C A T G T A C G T A C G
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T