Information for 18-GCGAGGCATGGACTGG (Motif 26)

C T A G A G T C A T C G C G T A A C T G A C T G A G T C C G T A A C G T A C T G A C T G C G T A A T G C A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A T C G C G A T A G T C A G T C G T C A A C G T A C T G A G T C A G T C A C G T A T G C C T A G A G T C
p-value:1e-9
log p-value:-2.218e+01
Information Content per bp:1.884
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.4 +/- 5.4bp
Average Position of motif in Background47.3 +/- 20.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCGAGGCATGGACTGG
--AAGGCAAGTGT---
 C T A G A G T C A T C G C G T A A C T G A C T G A G T C C G T A A C G T A C T G A C T G C G T A A T G C A C G T A C T G A C T G
A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GCGAGGCATGGACTGG
---AGGCCTNG-----
 C T A G A G T C A T C G C G T A A C T G A C T G A G T C C G T A A C G T A C T G A C T G C G T A A T G C A C G T A C T G A C T G
A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GCGAGGCATGGACTGG
--CAGGCCNNGGCCNN
 C T A G A G T C A T C G C G T A A C T G A C T G A G T C C G T A A C G T A C T G A C T G C G T A A T G C A C G T A C T G A C T G
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GCGAGGCATGGACTGG
SCAGYCADGCATGAC----
 A C G T A C G T A C G T C T A G A G T C A T C G C G T A A C T G A C T G A G T C C G T A A C G T A C T G A C T G C G T A A T G C A C G T A C T G A C T G
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GCGAGGCATGGACTGG
---AGGCCTAG-----
 C T A G A G T C A T C G C G T A A C T G A C T G A G T C C G T A A C G T A C T G A C T G C G T A A T G C A C G T A C T G A C T G
A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.50
Offset:5
Orientation:forward strand
Alignment:GCGAGGCATGGACTGG-
-----ACAGGATGTGGT
 C T A G A G T C A T C G C G T A A C T G A C T G A G T C C G T A A C G T A C T G A C T G C G T A A T G C A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.49
Offset:9
Orientation:forward strand
Alignment:GCGAGGCATGGACTGG---
---------GGTCTGGCAT
 C T A G A G T C A T C G C G T A A C T G A C T G A G T C C G T A A C G T A C T G A C T G C G T A A T G C A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:8
Score:0.48
Offset:6
Orientation:forward strand
Alignment:GCGAGGCATGGACTGG--
------NTGGGTGTGGCC
 C T A G A G T C A T C G C G T A A C T G A C T G A G T C C G T A A C G T A C T G A C T G C G T A A T G C A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---GCGAGGCATGGACTGG
GCAGCCAAGCGTGACN---
 A C G T A C G T A C G T C T A G A G T C A T C G C G T A A C T G A C T G A G T C C G T A A C G T A C T G A C T G C G T A A T G C A C G T A C T G A C T G
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C A C G T A C G T A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:10
Score:0.47
Offset:3
Orientation:forward strand
Alignment:GCGAGGCATGGACTGG----
---TATTATGGGATGGATAA
 C T A G A G T C A T C G C G T A A C T G A C T G A G T C C G T A A C G T A C T G A C T G C G T A A T G C A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A